ENSGALG00000010157


Gallus gallus

Features
Gene ID: ENSGALG00000010157
  
Biological name :TRAPPC6B
  
Synonyms : trafficking protein particle complex 6B / TRAPPC6B
  
Possible biological names infered from orthology : Q86SZ2 / Q9D289 / Trafficking protein particle complex subunit 6B
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 37642358
Gene end: 37646177
  
Corresponding Affymetrix probe sets: Gga.2820.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016493
Ensembl peptide - ENSGALP00000060109
NCBI entrez gene - 423337     See in Manteia.
RefSeq - NM_001252160
RefSeq Peptide - NP_001239089
swissprot - E1C3X0
swissprot - A0A1L1RMU4
Ensembl - ENSGALG00000010157
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc6bENSDARG00000016463Danio rerio
 Q86SZ2ENSG00000182400Homo sapiens
 Q9D289ENSMUSG00000020993Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007194  Transport protein particle (TRAPP) component
 IPR024096  NO signalling/Golgi transport ligand-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0043087 regulation of GTPase activity IEA
 biological_processGO:0048193 Golgi vesicle transport IEA
 cellular_componentGO:0005801 cis-Golgi network IBA
 cellular_componentGO:0005802 trans-Golgi network IBA
 cellular_componentGO:0030008 TRAPP complex IBA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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