ENSGALG00000010177


Gallus gallus
domainZFC3H1hathalf-a-tprrepeattetratricopeptide-likehelicalsuperfamilytetratricopeptiderepeat-containingputativezinc-fingerrnaprocessingexosomernasecomplexnucleus

Features
Gene ID: ENSGALG00000010177
  
Biological name :ZFC3H1
  
Synonyms : ZFC3H1 / zinc finger C3H1-type containing
  
Possible biological names infered from orthology : O60293
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 36351342
Gene end: 36388496
  
Corresponding Affymetrix probe sets: Gga.17024.1.S1_at (Chicken Array)   Gga.17393.1.S1_at (Chicken Array)   Gga.9536.1.S1_s_at (Chicken Array)   GgaAffx.23153.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016526
Ensembl peptide - ENSGALP00000051343
Ensembl peptide - ENSGALP00000049832
NCBI entrez gene - 417855     See in Manteia.
RefSeq - XM_015282977
RefSeq - XM_416097
swissprot - E1C1R6
swissprot - A0A1D5PEY1
swissprot - A0A1D5PAR8
Ensembl - ENSGALG00000010177
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 O60293ENSG00000133858Homo sapiens
 Zfc3h1ENSMUSG00000034163Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003107  HAT (Half-A-TPR) repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019607  Putative zinc-finger domain


Gene Ontology (GO)
nitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processnitrogen compound metabolic processcellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic processorganic substance metabolic process
cellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellcellprotein-containing complexprotein-containing complexorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 cellular_componentGO:0000178 exosome (RNase complex) IEA
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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