ENSGALG00000010694


Gallus gallus

Features
Gene ID: ENSGALG00000010694
  
Biological name :SECISBP2
  
Synonyms : SECIS binding protein 2 / SECISBP2
  
Possible biological names infered from orthology : Q96T21
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 43553945
Gene end: 43584879
  
Corresponding Affymetrix probe sets: Gga.13632.1.S1_at (Chicken Array)   Gga.14341.1.A1_at (Chicken Array)   Gga.14341.1.S1_at (Chicken Array)   Gga.16298.1.S1_s_at (Chicken Array)   Gga.1958.1.S1_a_at (Chicken Array)   Gga.9717.1.S1_s_at (Chicken Array)   Gga.9717.2.S1_s_at (Chicken Array)   GgaAffx.23297.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017372
NCBI entrez gene - 426815     See in Manteia.
RefSeq - XM_015280390
RefSeq - XM_424425
RefSeq - XM_015280391
RefSeq - XM_015280392
swissprot - F1NS30
Ensembl - ENSGALG00000010694
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 secisbp2ENSDARG00000073892Danio rerio
 Q96T21ENSG00000187742Homo sapiens
 Secisbp2ENSMUSG00000035139Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SECISBP2L / SECIS binding protein 2 like / Q93073*ENSGALG0000004136229


Protein motifs (from Interpro)
Interpro ID Name
 IPR004038  Ribosomal protein L7Ae/L30e/S12e/Gadd45
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001514 selenocysteine incorporation IEA
 biological_processGO:0021756 striatum development IEA
 biological_processGO:0048666 neuron development IEA
 biological_processGO:2000623 negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA
 molecular_functionGO:0035368 selenocysteine insertion sequence binding IEA
 molecular_functionGO:0043021 ribonucleoprotein complex binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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