ENSGALG00000011202


Gallus gallus

Features
Gene ID: ENSGALG00000011202
  
Biological name :COLQ
  
Synonyms : collagen like tail subunit of asymmetric acetylcholinesterase / COLQ
  
Possible biological names infered from orthology : Acetylcholinesterase collagenic tail peptide / O35348 / Q9Y215
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 34025221
Gene end: 34060317
  
Corresponding Affymetrix probe sets: GgaAffx.7118.1.S1_s_at (Chicken Array)   GgaAffx.7118.4.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018243
Ensembl peptide - ENSGALP00000057459
Ensembl peptide - ENSGALP00000054780
Ensembl peptide - ENSGALP00000046518
Ensembl peptide - ENSGALP00000046195
NCBI entrez gene - 776178     See in Manteia.
RefSeq - XM_001235719
RefSeq - XM_015281819
swissprot - A0A1D5P1I0
swissprot - A0A1D5PWX0
swissprot - F1NYJ0
swissprot - A0A1D5P0L7
swissprot - A0A1D5PPI0
Ensembl - ENSGALG00000011202
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 colqENSDARG00000019692Danio rerio
 COLQENSG00000206561Homo sapiens
 ColqENSMUSG00000057606Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG0000001065727
COL17A1 / collagen alpha-1(XVII) chain / Q07563* / Q9UMD9* / collagen type XVII alpha 1 chain* / Collagen alpha-1(XVII) chain 120 kDa linear IgA disease antigen homolog*ENSGALG0000002961727
P15988 / COL6A2 / Collagen alpha-2(VI) chain / Q02788* / P12110* / collagen type VI alpha 2 chain* / Mus musculus collagen, type VI, alpha 2 (Col6a2), transcript variant 2, mRNA.*ENSGALG0000003921627
COL6A1 / collagen alpha-1(VI) chain precursor / Q04857* / P12109* / Collagen alpha-1(VI) chain * / collagen type VI alpha 1 chain*ENSGALG0000000597426
COL28A1 / collagen type XXVIII alpha 1 chain / Q2UY09* / Q2UY11* / Collagen alpha-1(XXVIII) chain *ENSGALG0000001025923
COLEC12 / collectin-12 / Q5KU26* / Q8K4Q8* / collectin subfamily member 12*ENSGALG0000001491019
SCARA3 / scavenger receptor class A member 3 / Q6AZY7* / Q8C850*ENSGALG0000002665113


Protein motifs (from Interpro)
Interpro ID Name
 IPR008160  Collagen triple helix repeat
 IPR011936  Myxococcus cysteine-rich repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008582 regulation of synaptic growth at neuromuscular junction IEA
 biological_processGO:0071340 skeletal muscle acetylcholine-gated channel clustering IEA
 biological_processGO:0090150 establishment of protein localization to membrane IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0031594 neuromuscular junction IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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