ENSGALG00000011241


Gallus gallus

Features
Gene ID: ENSGALG00000011241
  
Biological name :RFTN1
  
Synonyms : raftlin / RFTN1
  
Possible biological names infered from orthology : Q14699 / Q6A0D4 / raftlin, lipid raft linker 1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 34392684
Gene end: 34486797
  
Corresponding Affymetrix probe sets: Gga.5735.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018309
NCBI entrez gene - 395109     See in Manteia.
RefSeq - NM_204458
RefSeq Peptide - NP_989789
swissprot - F1P375
Ensembl - ENSGALG00000011241
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FQ976914.1ENSDARG00000098654Danio rerio
 rftn1aENSDARG00000070831Danio rerio
 RFTN1ENSG00000131378Homo sapiens
 Rftn1ENSMUSG00000039316Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RFTN2 / raftlin family member 2 / Q52LD8* / Q8CHX7* / Raftlin-2 *ENSGALG0000003647126


Protein motifs (from Interpro)
Interpro ID Name
 IPR028169  Raftlin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001765 membrane raft assembly IEA
 biological_processGO:0002457 T cell antigen processing and presentation IEA
 biological_processGO:0032596 protein transport into membrane raft IEA
 biological_processGO:0032620 interleukin-17 production IEA
 biological_processGO:0033227 dsRNA transport IEA
 biological_processGO:0034138 toll-like receptor 3 signaling pathway IEA
 biological_processGO:0040007 growth IEA
 biological_processGO:0043330 response to exogenous dsRNA IEA
 biological_processGO:0050852 T cell receptor signaling pathway IEA
 biological_processGO:0050853 B cell receptor signaling pathway IEA
 biological_processGO:1903044 protein localization to membrane raft IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0045121 membrane raft IEA
 molecular_functionGO:0003725 double-stranded RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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