ENSGALG00000011275


Gallus gallus
domainDEPDC1rhoproteinsignaltransductiongtpase-activatingdepgtpaseactivationarsr-likehelix-turn-helixintracellularregulationtranscriptiondna-templatednucleustranscriptionalrepressorcomplex

Features
Gene ID: ENSGALG00000011275
  
Biological name :DEPDC1
  
Synonyms : DEPDC1 / DEP domain containing 1
  
Possible biological names infered from orthology : Depdc1a / DEP domain-containing protein 1A / Q5TB30 / Q8CIG0
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 28881061
Gene end: 28891395
  
Corresponding Affymetrix probe sets: Gga.11619.1.S1_at (Chicken Array)   GgaAffx.23512.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018376
NCBI entrez gene - 424710     See in Manteia.
RefSeq - XM_015291051
RefSeq - NM_001012928
RefSeq - XM_015291049
RefSeq - XM_015291050
RefSeq - XM_015291047
RefSeq - XM_015291048
RefSeq Peptide - NP_001012946
swissprot - Q5ZJ31
Ensembl - ENSGALG00000011275
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 depdc1aENSDARG00000018165Danio rerio
 DEPDC1ENSG00000024526Homo sapiens
 Q8CIG0ENSMUSG00000028175Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DEPDC1B / DEP domain-containing protein 1B / Q8BH88* / Q8WUY9* / DEP domain containing 1B*ENSGALG0000001472950
DEPDC7 / DEP domain containing 7 / Q91WS7* / Q96QD5* / DEP domain-containing protein 7 *ENSGALG0000001168121


Protein motifs (from Interpro)
Interpro ID Name
 IPR000198  Rho GTPase-activating protein domain
 IPR000591  DEP domain
 IPR008936  Rho GTPase activation protein
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
cell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcell communicationcellular response tocellular response to stimulusnitrogen compound menitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic pcellular metabolic processprimary metabolic prprimary metabolic processorganic substance meorganic substance metabolic process
cellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellcellorganelleorganelleprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0017053 transcriptional repressor complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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