ENSGALG00000011560


Gallus gallus

Features
Gene ID: ENSGALG00000011560
  
Biological name :PACRG
  
Synonyms : PACRG / parkin coregulated
  
Possible biological names infered from orthology : PARK2 co-regulated / Q96M98 / Q9DAK2
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 44419136
Gene end: 44611621
  
Corresponding Affymetrix probe sets: Gga.5620.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053903
Ensembl peptide - ENSGALP00000061255
Ensembl peptide - ENSGALP00000060529
Ensembl peptide - ENSGALP00000056894
Ensembl peptide - ENSGALP00000018830
Ensembl peptide - ENSGALP00000053028
NCBI entrez gene - 421576     See in Manteia.
RefSeq - XM_419614
RefSeq - XM_015284329
RefSeq - XM_015284330
RefSeq - XM_015284332
RefSeq - XM_015284333
RefSeq - XM_015284328
swissprot - A0A1D5PM30
swissprot - A0A1D5PJN2
swissprot - F1NWU1
swissprot - A0A1D5PVC9
Ensembl - ENSGALG00000011560
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pacrgENSDARG00000087556Danio rerio
 PACRGENSG00000112530Homo sapiens
 PacrgENSMUSG00000037196Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PACRGL / parkin coregulated like / Q8N7B6* / Q9D3X5* / 5730480H06Rik* / RIKEN cDNA 5730480H06 gene*ENSGALG0000001440616


Protein motifs (from Interpro)
Interpro ID Name
 IPR019399  Parkin co-regulated protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007286 spermatid development IEA
 biological_processGO:0060548 negative regulation of cell death IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0031982 vesicle IEA
 cellular_componentGO:0043005 neuron projection IEA
 cellular_componentGO:0044297 cell body IEA
 cellular_componentGO:0097225 sperm midpiece IEA
 molecular_functionGO:0001664 G-protein coupled receptor binding IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0030544 Hsp70 protein binding IEA
 molecular_functionGO:0031072 heat shock protein binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0043014 alpha-tubulin binding IEA
 molecular_functionGO:0048487 beta-tubulin binding IEA
 molecular_functionGO:0051087 chaperone binding IEA
 molecular_functionGO:0051879 Hsp90 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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