ENSGALG00000011624


Gallus gallus

Features
Gene ID: ENSGALG00000011624
  
Biological name :PNLDC1
  
Synonyms : PARN like, ribonuclease domain containing 1 / PNLDC1
  
Possible biological names infered from orthology : B2RXZ1 / Poly(A)-specific ribonuclease PNLDC1 / Q8NA58
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 45713493
Gene end: 45723911
  
Corresponding Affymetrix probe sets: GgaAffx.7395.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018968
NCBI entrez gene - 428595     See in Manteia.
RefSeq - XM_004935572
RefSeq - XM_004935573
RefSeq - XM_426152
swissprot - E1BVT8
Ensembl - ENSGALG00000011624
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PNLDC1ENSG00000146453Homo sapiens
 B2RXZ1ENSMUSG00000073460Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PARN / poly(A)-specific ribonuclease PARN / O95453* / poly(A)-specific ribonuclease*ENSGALG0000000309123


Protein motifs (from Interpro)
Interpro ID Name
 IPR006941  Ribonuclease CAF1
 IPR012337  Ribonuclease H-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000289 nuclear-transcribed mRNA poly(A) tail shortening IEA
 biological_processGO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004535 poly(A)-specific ribonuclease activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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