ENSGALG00000012574


Gallus gallus

Features
Gene ID: ENSGALG00000012574
  
Biological name :WDSUB1
  
Synonyms : WD repeat, sterile alpha motif and U-box domain containing 1 / WDSUB1
  
Possible biological names infered from orthology : Q8N9V3 / Q9D0I6 / WD repeat, SAM and U-box domain containing 1
  
Species: Gallus gallus
  
Chr. number: 7
Strand: -1
Band:
Gene start: 36715468
Gene end: 36740413
  
Corresponding Affymetrix probe sets: Gga.5996.1.S1_s_at (Chicken Array)   GgaAffx.11564.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000059528
Ensembl peptide - ENSGALP00000045366
Ensembl peptide - ENSGALP00000063627
Ensembl peptide - ENSGALP00000058810
Ensembl peptide - ENSGALP00000020504
Ensembl peptide - ENSGALP00000045281
NCBI entrez gene - 424331     See in Manteia.
RefSeq - XM_015290167
RefSeq - XM_015290163
RefSeq - XM_015290164
RefSeq - XM_015290165
RefSeq - XM_015290166
RefSeq - NM_001031263
RefSeq - XM_015290154
RefSeq - XM_015290155
RefSeq - XM_015290156
RefSeq - XM_015290157
RefSeq - XM_015290158
RefSeq - XM_015290159
RefSeq - XM_015290160
RefSeq - XM_015290161
RefSeq - XM_015290162
RefSeq Peptide - NP_001026434
swissprot - A0A1L1RLA5
swissprot - A0A1L1RJ85
swissprot - A0A0A0MQ50
Ensembl - ENSGALG00000012574
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A0AUS0ENSDARG00000090418Danio rerio
 Q8N9V3ENSG00000196151Homo sapiens
 Q9D0I6ENSMUSG00000026988Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
APAF1 / apoptotic peptidase activating factor 1 / O14727* / O88879* / Apoptotic protease-activating factor 1 *ENSGALG0000001153115
WDR88 / WD repeat domain 88 / Q6ZMY6*ENSGALG0000004229811


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR001680  WD40 repeat
 IPR003613  U box domain
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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