ENSGALG00000013154


Gallus gallus

Features
Gene ID: ENSGALG00000013154
  
Biological name :SLCO1C1
  
Synonyms : SLCO1C1 / solute carrier organic anion transporter family member 1C1
  
Possible biological names infered from orthology : Q9ERB5 / Q9NYB5
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 65190416
Gene end: 65211651
  
Corresponding Affymetrix probe sets: GgaAffx.8368.1.S1_s_at (Chicken Array)   GgaAffx.8368.10.S1_at (Chicken Array)   GgaAffx.8368.10.S1_s_at (Chicken Array)   GgaAffx.8368.7.S1_at (Chicken Array)   GgaAffx.8368.7.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021444
NCBI entrez gene - 418186     See in Manteia.
RefSeq - NM_001039097
RefSeq Peptide - NP_001034186
swissprot - F1NQ63
Ensembl - ENSGALG00000013154
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slco1c1ENSDARG00000016749Danio rerio
 Q9NYB5ENSG00000139155Homo sapiens
 Q9ERB5ENSMUSG00000030235Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLCO1B3 / Gallus gallus solute carrier organic anion transporter family member 1B3 (SLCO1B3), mRNA. / Q9Y6L6* / Q9NPD5* / G3V0H7* / Q9JJL3* / SLCO1B1* / Slco1b2* / SLCO1B7* / AC011604.2* / ...ENSGALG0000001927749
ENSGALG0000001927644
SLCO1A2 / solute carrier organic anion transporter family member 1A2 / Gm5724* / Q99J94* / Q9EP96* / P46721* / Q9QXZ6* / Slco1a6* / Slco1a1* / Slco1a4* / Slco1a5* / Solute carrier organic a...ENSGALG0000003129342
SLCO2A1 / solute carrier organic anion transporter family member 2A1 / Q92959* / Q9EPT5*ENSGALG0000000647130
SLCO2B1 / solute carrier organic anion transporter family member 2B1 / O94956* / Q8BXB6*ENSGALG0000001730230
SLCO4A1 / solute carrier organic anion transporter family member 4A1 / Q8K078* / Q96BD0* / Mus musculus solute carrier organic anion transporter family, member 4a1 (Slco4a1), transcript va...ENSGALG0000000546028
SLCO5A1 / solute carrier organic anion transporter family member 5A1 / Q9H2Y9*ENSGALG0000002984226
SLCO3A1 / solute carrier organic anion transporter family member 3A1 / Q8R3L5* / Q9UIG8*ENSGALG0000000687125
SLCO4C1 / solute carrier organic anion transporter family member 4C1 / Q6ZQN7* / Q8BGD4*ENSGALG0000002676820


Protein motifs (from Interpro)
Interpro ID Name
 IPR002350  Kazal domain
 IPR004156  Organic anion transporter polypeptide
 IPR020846  Major facilitator superfamily domain
 IPR030764  Solute carrier organic anion transporter family member 1C1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015711 organic anion transport IEA
 biological_processGO:0015721 bile acid and bile salt transport IEA
 biological_processGO:0043252 sodium-independent organic anion transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070327 thyroid hormone transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0008514 organic anion transmembrane transporter activity IEA
 molecular_functionGO:0015125 bile acid transmembrane transporter activity IBA
 molecular_functionGO:0015347 sodium-independent organic anion transmembrane transporter activity IBA
 molecular_functionGO:0015349 thyroid hormone transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Transport of organic anions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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