ENSGALG00000013579


Gallus gallus

Features
Gene ID: ENSGALG00000013579
  
Biological name :FAT1
  
Synonyms : FAT1 / FAT atypical cadherin 1
  
Possible biological names infered from orthology : Q14517
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 62100703
Gene end: 62194149
  
Corresponding Affymetrix probe sets: Gga.9480.1.S1_at (Chicken Array)   GgaAffx.24226.1.S1_at (Chicken Array)   GgaAffx.8655.1.S1_s_at (Chicken Array)   GgaAffx.8660.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022061
NCBI entrez gene - 395168     See in Manteia.
RefSeq - XM_015285559
RefSeq - XM_015285560
RefSeq - XM_015285561
RefSeq - XM_015285562
RefSeq - XM_015285563
RefSeq - XM_015285564
RefSeq - XM_015285565
RefSeq - XM_420680
RefSeq - XM_004935990
swissprot - F1NWW5
Ensembl - ENSGALG00000013579
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fat1aENSDARG00000017591Danio rerio
 fat1bENSDARG00000019063Danio rerio
 FAT1ENSG00000083857Homo sapiens
 Fat1ENSMUSG00000070047Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FAT3 / FAT atypical cadherin 3 / Q8TDW7*ENSGALG0000001722953
FAT2 / FAT atypical cadherin 2 / Q5F226* / Q9NYQ8* / Protocadherin Fat 2 *ENSGALG0000000432047
FAT4 / FAT atypical cadherin 4 / Q2PZL6* / Q6V0I7* / Protocadherin Fat 4 *ENSGALG0000001182322
cHz-cadherin precursor ENSGALG0000003308914
DCHS1 / dachsous cadherin-related 1 / E9PVD3* / Q96JQ0* / Protocadherin-16 *ENSGALG0000001733412
CELSR1 / cadherin EGF LAG seven-pass G-type receptor 1 / O35161* / Q9NYQ6*ENSGALG0000004335512
CDH23* / Q99PF4* / Q9H251* / Cadherin-23 * / cadherin related 23*ENSGALG000000046539
CDH23* / Q99PF4* / Q9H251* / Cadherin-23 * / cadherin related 23*ENSGALG000000368249
ENSGALG000000327508
CELSR3 / cadherin EGF LAG seven-pass G-type receptor 3 / Q91ZI0* / Q9NYQ7*ENSGALG000000367638
ENSGALG000000046304
CELSR2* / Q9HCU4* / cadherin EGF LAG seven-pass G-type receptor 2* / cadherin EGF LAG seven-pass G-type receptor 2 isoform 2 *ENSGALG000000429612


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001791  Laminin G domain
 IPR001881  EGF-like calcium-binding domain
 IPR002126  Cadherin
 IPR013032  EGF-like, conserved site
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR015919  Cadherin-like
 IPR018097  EGF-like calcium-binding, conserved site
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007015 actin filament organization IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007163 establishment or maintenance of cell polarity IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005911 cell-cell junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030027 lamellipodium IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030175 filopodium IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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