ENSGALG00000013968


Gallus gallus

Features
Gene ID: ENSGALG00000013968
  
Biological name :SGCB
  
Synonyms : sarcoglycan beta / SGCB
  
Possible biological names infered from orthology : Beta-sarcoglycan / P82349 / Q16585
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 66587695
Gene end: 66593630
  
Corresponding Affymetrix probe sets: GgaAffx.8877.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046941
Ensembl peptide - ENSGALP00000022600
NCBI entrez gene - 422760     See in Manteia.
RefSeq - XM_015285439
RefSeq - NM_001031155
RefSeq - XM_015285438
RefSeq Peptide - NP_001026326
swissprot - Q5ZJR7
swissprot - A0A1D5P2P3
Ensembl - ENSGALG00000013968
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgcbENSDARG00000052341Danio rerio
 SGCBENSG00000163069Homo sapiens
 SgcbENSMUSG00000029156Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006875  Sarcoglycan complex subunit protein
 IPR027659  Beta-sarcoglycan


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007517 muscle organ development IEA
 biological_processGO:0048747 muscle fiber development IEA
 biological_processGO:0055013 cardiac muscle cell development IEA
 biological_processGO:0061024 membrane organization IBA
 biological_processGO:0097084 vascular smooth muscle cell development IEA
 cellular_componentGO:0016010 dystrophin-associated glycoprotein complex IEA
 cellular_componentGO:0016011 dystroglycan complex IEA
 cellular_componentGO:0016012 sarcoglycan complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0042383 sarcolemma IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr