ENSGALG00000014276


Gallus gallus

Features
Gene ID: ENSGALG00000014276
  
Biological name :CIR1
  
Synonyms : CIR1 / Corepressor interacting with RBPJ 1 / Q5ZI03
  
Possible biological names infered from orthology : Q86X95 / Q9DA19
  
Species: Gallus gallus
  
Chr. number: 7
Strand: 1
Band:
Gene start: 16979747
Gene end: 17000681
  
Corresponding Affymetrix probe sets: GgaAffx.13084.1.S1_at (Chicken Array)   GgaAffx.9063.1.S1_s_at (Chicken Array)   GgaAffx.9154.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000023047
Ensembl peptide - ENSGALP00000045224
NCBI entrez gene - 426529     See in Manteia.
RefSeq - NM_001031386
RefSeq Peptide - NP_001026557
swissprot - E1BVI7
swissprot - A0A1D5NXX1
swissprot - Q5ZI03
Ensembl - ENSGALG00000014276
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CIR1ENSDARG00000099733Danio rerio
 CIR1ENSG00000138433Homo sapiens
 Cir1ENSMUSG00000041777Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019339  CBF1-interacting co-repressor CIR, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0000118 histone deacetylase complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 molecular_functionGO:0019901 protein kinase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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