ENSGALG00000015036


Gallus gallus

Features
Gene ID: ENSGALG00000015036
  
Biological name :RIC1
  
Synonyms : RIC1 / RIC1 homolog, RAB6A GEF complex partner 1
  
Possible biological names infered from orthology : Q4ADV7 / Q69ZJ7 / RAB6A-GEF complex partner protein 1
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 27712579
Gene end: 27762732
  
Corresponding Affymetrix probe sets: Gga.16245.1.S1_at (Chicken Array)   Gga.20071.1.S1_at (Chicken Array)   Gga.9568.1.S1_at (Chicken Array)   GgaAffx.9541.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000024204
Ensembl peptide - ENSGALP00000047518
NCBI entrez gene - 427226     See in Manteia.
RefSeq - XM_003643000
RefSeq - XM_004949066
RefSeq - XM_015280140
swissprot - E1BZU6
swissprot - A0A1D5P4B0
Ensembl - ENSGALG00000015036
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RIC1ENSG00000107036Homo sapiens
 Ric1ENSMUSG00000038658Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009771  Ribosome control protein 1
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:1903363 negative regulation of cellular protein catabolic process IEA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0034066 RIC1-RGP1 guanyl-nucleotide exchange factor complex IEA
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA


Pathways (from Reactome)
Pathway description
Intra-Golgi traffic
Retrograde transport at the Trans-Golgi-Network
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002394 RGP1 / RGP1 homolog, RAB6A GEF complex partner 1 / Q8BHT7* / Q92546* / RAB6A-GEF complex partner protein 2 *  / complex
 ENSGALG00000017320 RAB6A / Q1KME6 / Ras-related protein Rab-6A / RAB6D* / RAB6C* / Q9H0N0* / P35279* / P20340* / RAB6A, member RAS oncogene family* / RAB6D, member RAS oncogene family* / RAB6C, member RAS on...  / complex / reaction
 ENSGALG00000009790 RAB33B / Q5ZHV1 / Ras-related protein Rab-33B / Q9H082* / O35963* / RAB33B, member RAS oncogene family*  / complex / reaction






 

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