ENSGALG00000015193


Gallus gallus

Features
Gene ID: ENSGALG00000015193
  
Biological name :CCDC80
  
Synonyms : CCDC80 / coiled-coil domain-containing protein 80 precursor
  
Possible biological names infered from orthology : coiled-coil domain containing 80 / Coiled-coil domain-containing protein 80 / Q76M96 / Q8R2G6
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 83535298
Gene end: 83558902
  
Corresponding Affymetrix probe sets: Gga.5111.1.S1_at (Chicken Array)   Gga.5111.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000061144
Ensembl peptide - ENSGALP00000024466
NCBI entrez gene - 395074     See in Manteia.
RefSeq - NM_204431
RefSeq Peptide - NP_989762
swissprot - F1NTI1
swissprot - A0A1L1RQS2
Ensembl - ENSGALG00000015193
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccdc80ENSDARG00000000002Danio rerio
 ccdc80l1ENSDARG00000030975Danio rerio
 CCDC80ENSG00000091986Homo sapiens
 Ccdc80ENSMUSG00000022665Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SRPX / sushi repeat containing protein, X-linked / P78539* / Q9R0M3* / Sushi-repeat-containing protein SRPX *ENSGALG000000431009
SRPX2 / sushi repeat containing protein, X-linked 2 / O60687* / Q8R054* / Sushi repeat-containing protein SRPX2 *ENSGALG000000067967


Protein motifs (from Interpro)
Interpro ID Name
 IPR025232  Domain of unknown function DUF4174
 IPR028768  Sushi repeat-containing protein SRPX2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010811 positive regulation of cell-substrate adhesion IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0005614 interstitial matrix IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0001968 fibronectin binding IEA
 molecular_functionGO:0005539 glycosaminoglycan binding IEA
 molecular_functionGO:0008201 heparin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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