ENSGALG00000015252


Gallus gallus

Features
Gene ID: ENSGALG00000015252
  
Biological name :ST3GAL6
  
Synonyms : ST3GAL6 / type 2 lactosamine alpha-2,3-sialyltransferase
  
Possible biological names infered from orthology : Mus musculus ST3 beta-galactoside alpha-2,3-sialyltransferase 6 (St3gal6), transcript variant 2, mRNA. / Q8VIB3 / Q9Y274 / ST3 beta-galactoside alpha-2,3-sialyltransferase 6
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 84210321
Gene end: 84252641
  
Corresponding Affymetrix probe sets: Gga.5557.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057362
Ensembl peptide - ENSGALP00000024564
Ensembl peptide - ENSGALP00000036128
NCBI entrez gene - 395138     See in Manteia.
RefSeq - XM_015295740
RefSeq - XM_015295716
RefSeq - XM_015295724
RefSeq - XM_015295729
RefSeq - XM_015295735
RefSeq - NM_204479
RefSeq - XM_015295670
RefSeq - XM_015295674
RefSeq - XM_015295676
RefSeq - XM_015295681
RefSeq - XM_015295685
RefSeq - XM_015295693
RefSeq - XM_015295701
RefSeq - XM_015295703
RefSeq - XM_015295705
RefSeq - XM_015295708
RefSeq Peptide - NP_989810
swissprot - F1NQP1
swissprot - F1NSY3
swissprot - A0A1D5PWM6
Ensembl - ENSGALG00000015252
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9Y274ENSG00000064225Homo sapiens
 Q8VIB3ENSMUSG00000022747Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ST3GAL3 / ST3 beta-galactoside alpha-2,3-sialyltransferase 3 / P97325* / Q11203* / CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase *ENSGALG0000001008335
ST3GAL4 / ST3 beta-galactoside alpha-2,3-sialyltransferase 4 / Q11206* / Q91Y74*ENSGALG0000002974734
ST3GAL5 / ST3 beta-galactoside alpha-2,3-sialyltransferase 5 / O88829* / Q9UNP4* / Lactosylceramide alpha-2,3-sialyltransferase *ENSGALG0000003326029
ENSGALG0000000700324
ENSGALG0000000690021
Q92183 / ST6GALNAC1 / Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 / Q9NSC7* / Q9QZ39* / ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1*ENSGALG0000000186220
Q11200 / ST3GAL1 / CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1 / P54751* / Q11201* / ST3 beta-galactoside alpha-2,3-sialyltransferase 1*ENSGALG0000003777320
ST6GALNAC2 / alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 / Q9UJ37* / P70277* / ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2* / ST6 (alpha-N-acetyl-neuraminyl-2...ENSGALG0000000188319
ST3GAL2 / CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase 2 / Q11204* / Q16842* / ST3 beta-galactoside alpha-2,3-sialyltransferase 2*ENSGALG0000000265119
ENSGALG0000004246217


Protein motifs (from Interpro)
Interpro ID Name
 IPR001675  Glycosyl transferase family 29
 IPR012163  Sialyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0009311 oligosaccharide metabolic process IBA
 biological_processGO:0018279 protein N-linked glycosylation via asparagine IBA
 biological_processGO:0097503 sialylation IEA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008373 sialyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0052798 beta-galactoside alpha-2,3-sialyltransferase activity IBA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis
Sialic acid metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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