ENSGALG00000015660


Gallus gallus

Features
Gene ID: ENSGALG00000015660
  
Biological name :SNX30
  
Synonyms : SNX30 / sorting nexin family member 30
  
Possible biological names infered from orthology : Q5VWJ9 / Q8CE50 / Sorting nexin-30
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 65861808
Gene end: 65910918
  
Corresponding Affymetrix probe sets: Gga.11940.1.S1_at (Chicken Array)   Gga.11940.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000025200
Ensembl peptide - ENSGALP00000052250
NCBI entrez gene - 427330     See in Manteia.
RefSeq - XM_424910
swissprot - A0A1D5PHH1
swissprot - F1ND98
Ensembl - ENSGALG00000015660
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx30ENSDARG00000069601Danio rerio
 SNX30ENSG00000148158Homo sapiens
 Snx30ENSMUSG00000028385Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNX7 / sorting nexin 7 / Q9CY18* / Q9UNH6*ENSGALG0000000547844
SNX4 / sorting nexin 4 / O95219* / Q91YJ2*ENSGALG0000001205220


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR004148  BAR domain
 IPR027267  AH/BAR domain superfamily
 IPR028649  Sorting nexin-30


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0016050 vesicle organization IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IBA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr