ENSGALG00000016067


Gallus gallus

Features
Gene ID: ENSGALG00000016067
  
Biological name :HMGN1
  
Synonyms : HMGN1 / Non-histone chromosomal protein HMG-14B / P12274
  
Possible biological names infered from orthology : high mobility group nucleosome binding domain 1 / Non-histone chromosomal protein HMG-14 / P05114 / P18608
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 107997368
Gene end: 108003836
  
Corresponding Affymetrix probe sets: Gga.1189.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000025837
Ensembl peptide - ENSGALP00000062811
NCBI entrez gene - 395999     See in Manteia.
RefSeq - XM_015300351
RefSeq - NM_205106
RefSeq Peptide - NP_990437
swissprot - P12274
swissprot - F1P0C0
Ensembl - ENSGALG00000016067
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HMGN1ENSG00000205581Homo sapiens
 Hmgn1ENSMUSG00000040681Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P12902 / Non-histone chromosomal protein HMG-14A ENSGALG0000000713151


Protein motifs (from Interpro)
Interpro ID Name
 IPR000079  High mobility group protein HMGN


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding IEA


Pathways (from Reactome)
Pathway description
Formation of TC-NER Pre-Incision Complex
Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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