ENSGALG00000016191


Gallus gallus

Features
Gene ID: ENSGALG00000016191
  
Biological name :PKNOX1
  
Synonyms : PBX/knotted 1 homeobox 1 / PKNOX1
  
Possible biological names infered from orthology : Homeobox protein PKNOX1 / O70477 / P55347
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 109623483
Gene end: 109660483
  
Corresponding Affymetrix probe sets: GgaAffx.24886.1.S1_at (Chicken Array)   GgaAffx.24886.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026052
Ensembl peptide - ENSGALP00000054360
NCBI entrez gene - 418542     See in Manteia.
RefSeq - XM_015300914
RefSeq - XM_015300917
RefSeq - XM_015300923
RefSeq - XM_015300928
RefSeq - XM_015300931
RefSeq - XM_015300937
RefSeq - XM_015300904
RefSeq - XM_015300909
swissprot - E1BYI1
Ensembl - ENSGALG00000016191
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pknox1.1ENSDARG00000018765Danio rerio
 pknox1.2ENSDARG00000036542Danio rerio
 P55347ENSG00000160199Homo sapiens
 O70477ENSMUSG00000006705Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PKNOX2 / PBX/knotted 1 homeobox 2 / Q8BG99* / Q96KN3* / Homeobox protein PKNOX2 *ENSGALG0000004310359
MEIS2 / homeobox protein Meis2 / O14770* / P97367* / Meis homeobox 2*ENSGALG0000003911832
MEIS1 / homeobox protein Meis1 / O00470* / Q60954* / Meis homeobox 1*ENSGALG0000004162632
TGIF1 / Q90655 / Homeobox protein AKR / Q15583* / P70284* / TGFB induced factor homeobox 1*ENSGALG0000001479511
TGIF2 / TGFB induced factor homeobox 2 / Q8C0Y1* / Q9GZN2*ENSGALG0000002408110


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR008422  Homeobox KN domain
 IPR009057  Homeobox-like domain superfamily
 IPR032453  Homeobox protein PKNOX/Meis, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0030097 hemopoiesis IEA
 biological_processGO:0030217 T cell differentiation IEA
 biological_processGO:0030218 erythrocyte differentiation IEA
 biological_processGO:0043010 camera-type eye development IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003705 transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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