ENSGALG00000016236


Gallus gallus

Features
Gene ID: ENSGALG00000016236
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 112079778
Gene end: 112151195
  
Corresponding Affymetrix probe sets: Gga.4702.1.S1_at (Chicken Array)   GgaAffx.24906.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026130
Ensembl peptide - ENSGALP00000051439
Ensembl peptide - ENSGALP00000050911
NCBI entrez gene - 418569     See in Manteia.
RefSeq - XM_015301733
RefSeq - XM_015301738
RefSeq - XM_015301742
RefSeq - XM_015301747
swissprot - A0A1D5PF76
swissprot - A0A1D5PDR5
swissprot - E1BWJ5
Ensembl - ENSGALG00000016236
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
USP24 / ubiquitin specific peptidase 24 / B1AY13* / Q9UPU5*ENSGALG0000001080531
USP34 / ubiquitin carboxyl-terminal hydrolase 34 / Q6ZQ93* / Q70CQ2* / ubiquitin specific peptidase 34*ENSGALG0000000445520
USP47 / ubiquitin specific peptidase 47 / Q8BY87* / Q96K76*ENSGALG000000055697
USP7 / ubiquitin specific peptidase 7 / Q93009*ENSGALG000000073077
USP48 / ubiquitin carboxyl-terminal hydrolase 48 / Q3V0C5* / Q86UV5* / ubiquitin specific peptidase 48*ENSGALG000000308577
USP40 / ubiquitin specific peptidase 40 / Q8BWR4* / Q9NVE5*ENSGALG000000042286
USP41* / USP18* / Q9WTV6* / Q3LFD5* / Q9UMW8* / ubiquitin specific peptidase 18* / ubiquitin specific peptidase 41*ENSGALG000000130573


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR016024  Armadillo-type fold
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016477 cell migration IBA
 biological_processGO:0016579 protein deubiquitination IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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