ENSGALG00000017162


Gallus gallus

Features
Gene ID: ENSGALG00000017162
  
Biological name :NPAT
  
Synonyms : NPAT / nuclear protein, coactivator of histone transcription
  
Possible biological names infered from orthology : Protein NPAT / Q14207 / Q8BMA5
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 180348469
Gene end: 180365548
  
Corresponding Affymetrix probe sets: Gga.7529.1.S1_at (Chicken Array)   GgaAffx.11001.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044122
Ensembl peptide - ENSGALP00000027663
NCBI entrez gene - 418967     See in Manteia.
RefSeq - XM_015279520
RefSeq - XM_015279515
RefSeq - XM_015279517
swissprot - F1P0H0
swissprot - A0A1D5NUV4
Ensembl - ENSGALG00000017162
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 npatENSDARG00000055548Danio rerio
 NPATENSG00000149308Homo sapiens
 NpatENSMUSG00000033054Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR031442  Protein NPAT, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000083 regulation of transcription involved in G1/S transition of mitotic cell cycle IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:1903507 negative regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0015030 Cajal body IEA
 cellular_componentGO:0097504 Gemini of coiled bodies IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0047485 protein N-terminus binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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