ENSGALG00000017220


Gallus gallus

Features
Gene ID: ENSGALG00000017220
  
Biological name :TAF1D
  
Synonyms : TAF1D / TATA-box binding protein associated factor, RNA polymerase I subunit D
  
Possible biological names infered from orthology : Q9D4V4 / Q9H5J8
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 185871724
Gene end: 185874291
  
Corresponding Affymetrix probe sets: Gga.13505.1.S1_at (Chicken Array)   Gga.9636.1.S1_at (Chicken Array)   Gga.9636.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027781
NCBI entrez gene - 419002     See in Manteia.
RefSeq - XM_015280447
RefSeq - XM_015280453
RefSeq - XM_015280456
RefSeq - XM_015280458
RefSeq - XM_015280465
RefSeq - XM_015280473
RefSeq - XM_015280475
RefSeq - XM_417196
RefSeq - XM_015280442
swissprot - F1NY03
Ensembl - ENSGALG00000017220
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAF1DENSG00000166012Homo sapiens
 Taf1dENSMUSG00000031939Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR027976  TATA box-binding protein-associated factor 1D


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005668 RNA polymerase transcription factor SL1 complex IEA


Pathways (from Reactome)
Pathway description
B-WICH complex positively regulates rRNA expression
RNA Polymerase I Transcription Initiation
RNA Polymerase I Promoter Escape
RNA Polymerase I Chain Elongation
RNA Polymerase I Transcription Termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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