ENSGALG00000017368


Gallus gallus

Features
Gene ID: ENSGALG00000017368
  
Biological name :TRNT1
  
Synonyms : tRNA nucleotidyl transferase 1 / TRNT1
  
Possible biological names infered from orthology : CCA tRNA nucleotidyltransferase 1, mitochondrial / Q8K1J6 / Q96Q11
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 18141432
Gene end: 18145067
  
Corresponding Affymetrix probe sets: Gga.11861.1.S1_at (Chicken Array)   Gga.11861.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027999
Ensembl peptide - ENSGALP00000063808
Ensembl peptide - ENSGALP00000061743
Ensembl peptide - ENSGALP00000048192
NCBI entrez gene - 416103     See in Manteia.
RefSeq - XM_015293207
RefSeq - XM_015293208
swissprot - A0A1L1RY78
swissprot - A0A1L1RSG2
swissprot - A0A1D5P668
swissprot - F1NMW8
Ensembl - ENSGALG00000017368
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trnt1ENSDARG00000075297Danio rerio
 TRNT1ENSG00000072756Homo sapiens
 Trnt1ENSMUSG00000013736Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002646  Poly A polymerase, head domain
 IPR032828  tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001680 tRNA 3"-terminal CCA addition IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:1990180 mitochondrial tRNA 3"-end processing IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA
 molecular_functionGO:0052929 ATP:3"-cytidine-cytidine-tRNA adenylyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr