ENSGALG00000017898


Gallus gallus

Features
Gene ID: ENSGALG00000017898
  
Biological name :RF00003
  
Synonyms : RF00003
  
Possible biological names infered from orthology : Gm23050 / Gm23294 / Gm23692 / Gm24671 / Gm24725 / Gm24959 / Gm24961 / Gm25153 / Gm25589 / Gm25730 / Gm26057 / predicted gene, 23050 / predicted gene, 23294 / predicted gene, 23692 / predicted gene, 24671 / predicted gene, 24725 / predicted gene, 24959 / predicted gene, 24961 / predicted gene, 25153 / predicted gene, 25589 / predicted gene, 25730 / predicted gene, 26057 / RNA, U1 small nuclear 125, pseudogene / RNU1-125P
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 117176547
Gene end: 117176682
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl - ENSGALG00000017898
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNU1-125PENSG00000252561Homo sapiens
 Gm23050ENSMUSG00000095980Mus musculus
 Gm23294ENSMUSG00000077338Mus musculus
 Gm23692ENSMUSG00000075829Mus musculus
 Gm24671ENSMUSG00000077347Mus musculus
 Gm24725ENSMUSG00000088854Mus musculus
 Gm24959ENSMUSG00000088549Mus musculus
 Gm24961ENSMUSG00000088543Mus musculus
 Gm25153ENSMUSG00000087743Mus musculus
 Gm25589ENSMUSG00000064436Mus musculus
 Gm25730ENSMUSG00000095446Mus musculus
 Gm26057ENSMUSG00000094369Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000001793371
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002615871
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002693271
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002820271
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002876671
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002908771
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000003101171
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000003206271
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000004008171
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000004076271
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000004316871
RF00003 / Gm23294* / Gm23692* / Gm24671* / Gm24725* / Gm24959* / Gm24961* / Gm25153* / Gm25589* / Gm25730* / Gm26057* / Gm23050* / RNU1-125P* / predicted gene, 23050* / predicted gene, 2467...ENSGALG0000003431570
RF00003 / Gm23294* / Gm23692* / Gm24671* / Gm24725* / Gm24959* / Gm24961* / Gm25153* / Gm25589* / Gm25730* / Gm26057* / Gm23050* / RNU1-125P* / predicted gene, 23050* / predicted gene, 2467...ENSGALG0000001792368
RF00003 / Gm23294* / Gm23692* / Gm24671* / Gm24725* / Gm24959* / Gm24961* / Gm25153* / Gm25589* / Gm25730* / Gm26057* / Gm23050* / RNU1-125P* / predicted gene, 23050* / predicted gene, 2467...ENSGALG0000001795468
RF00003 / Gm26170* / RNU1-93P* / predicted gene, 26170* / RNA, U1 small nuclear 93, pseudogene*ENSGALG0000001795367
RF00003 / RNU1-58P* / RNA, U1 small nuclear 58, pseudogene*ENSGALG0000001793865
RF00003 / Gm23827* / Gm23980* / Gm24014* / Gm24192* / Gm24720* / Gm24788* / Gm25481* / Gm25728* / Gm25938* / RNU1-6P* / Gm22945* / RNU1-5P* / RNU1-68P* / RNU1-143P* / predicted gene, 24720*...ENSGALG0000002569363
RF00003 / Gm23294* / Gm23692* / Gm24671* / Gm24725* / Gm24959* / Gm24961* / Gm25153* / Gm25589* / Gm25730* / Gm26057* / Gm23050* / RNU1-125P* / predicted gene, 23050* / predicted gene, 2467...ENSGALG0000003334963
RF00003 / Gm23972* / predicted gene, 23972*ENSGALG0000001793261
RF00003ENSGALG0000001792760


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match