ENSGALG00000025842


Gallus gallus

Features
Gene ID: ENSGALG00000025842
  
Biological name :TPM2
  
Synonyms : P19352 / TPM2 / Tropomyosin beta chain
  
Possible biological names infered from orthology : P07951 / P58774 / tropomyosin 2 / tropomyosin 2, beta
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 9207194
Gene end: 9221258
  
Corresponding Affymetrix probe sets: Gga.4975.1.S1_a_at (Chicken Array)   Gga.4975.2.S1_at (Chicken Array)   Gga.4975.2.S1_a_at (Chicken Array)   Gga.4975.5.S1_a_at (Chicken Array)   Gga.4975.5.S1_x_at (Chicken Array)   GgaAffx.25537.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041062
Ensembl peptide - ENSGALP00000049530
Ensembl peptide - ENSGALP00000062685
Ensembl peptide - ENSGALP00000050776
Ensembl peptide - ENSGALP00000041937
Ensembl peptide - ENSGALP00000047578
NCBI entrez gene - 396430     See in Manteia.
RefSeq - XM_015277271
RefSeq - XM_015277264
RefSeq - XM_015277265
RefSeq - XM_015277267
RefSeq - XM_015277268
RefSeq - XM_015277269
RefSeq - XM_015277270
RefSeq - NM_205446
RefSeq - XM_015277260
RefSeq - XM_015277261
RefSeq - XM_015277262
RefSeq - XM_015277263
RefSeq Peptide - NP_990777
swissprot - A0A1D5P9X2
swissprot - A0A1D5P4H0
swissprot - P19352
swissprot - Q05705
swissprot - Q05706
Ensembl - ENSGALG00000025842
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TPM2ENSG00000198467Homo sapiens
 Tpm2ENSMUSG00000028464Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TPM3 / Gallus gallus tropomyosin 3 (TPM3), transcript variant 3, mRNA. / P06753* / tropomyosin 3*ENSGALG0000001353781
TPM1 / P04268 / Tropomyosin alpha-1 chain / P09493* / P58771* / tropomyosin 1* / tropomyosin 1, alpha*ENSGALG0000000352179
TPM4 / tropomyosin 4 / P67936* / Q6IRU2* / Tropomyosin alpha-4 chain *ENSGALG0000000256360


Protein motifs (from Interpro)
Interpro ID Name
 IPR000533  Tropomyosin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction IBA
 biological_processGO:0007015 actin filament organization IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005862 muscle thin filament tropomyosin IBA
 cellular_componentGO:0005884 actin filament IBA
 cellular_componentGO:0015629 actin cytoskeleton ISS
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008092 cytoskeletal protein binding IPI
 molecular_functionGO:0008307 structural constituent of muscle IBA
 molecular_functionGO:0042802 identical protein binding ISS
 molecular_functionGO:0042803 protein homodimerization activity ISS
 molecular_functionGO:0046982 protein heterodimerization activity ISS
 molecular_functionGO:0051015 actin filament binding IBA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction
Smooth Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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