ENSGALG00000026428


Gallus gallus

Features
Gene ID: ENSGALG00000026428
  
Biological name :CHMP6
  
Synonyms : Charged multivesicular body protein 6 / CHMP6 / Q5ZL55
  
Possible biological names infered from orthology : P0C0A3 / Q96FZ7
  
Species: Gallus gallus
  
Chr. number: 18
Strand: -1
Band:
Gene start: 9428607
Gene end: 9434497
  
Corresponding Affymetrix probe sets: Gga.6206.1.S1_s_at (Chicken Array)   GgaAffx.11982.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041343
NCBI entrez gene - 428673     See in Manteia.
RefSeq - NM_001031529
RefSeq Peptide - NP_001026700
swissprot - Q5ZL55
swissprot - R4GH14
Ensembl - ENSGALG00000026428
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chmp6aENSDARG00000097451Danio rerio
 chmp6bENSDARG00000102024Danio rerio
 CHMP6ENSG00000176108Homo sapiens
 Chmp6ENSMUSG00000025371Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005024  Snf7 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000920 cell separation after cytokinesis IEA
 biological_processGO:0006997 nucleus organization IEA
 biological_processGO:0007034 vacuolar transport IEA
 biological_processGO:0007080 mitotic metaphase plate congression IEA
 biological_processGO:0007175 negative regulation of epidermal growth factor-activated receptor activity IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0039702 viral budding via host ESCRT complex IEA
 cellular_componentGO:0000815 ESCRT III complex IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0012505 endomembrane system IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 molecular_functionGO:0044877 protein-containing complex binding IEA
 molecular_functionGO:0047485 protein N-terminus binding IEA


Pathways (from Reactome)
Pathway description
Macroautophagy
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr