ENSGALG00000026747


Gallus gallus

Features
Gene ID: ENSGALG00000026747
  
Biological name :GTF2A1L
  
Synonyms : GTF2A1L
  
Possible biological names infered from orthology : Q8R4I4 / TFIIA-alpha and beta-like factor
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 7644760
Gene end: 7656111
  
Corresponding Affymetrix probe sets: Gga.10558.1.A1_at (Chicken Array)   Gga.10558.1.S1_at (Chicken Array)   GgaAffx.22798.1.S1_at (Chicken Array)   GgaAffx.22798.2.S1_at (Chicken Array)   GgaAffx.22798.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043297
NCBI entrez gene - 100534591     See in Manteia.
RefSeq - XM_015278014
RefSeq - NM_001204866
RefSeq - XM_015278015
RefSeq Peptide - NP_001191795
swissprot - R4GM48
Ensembl - ENSGALG00000026747
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gtf2a1lENSDARG00000063670Danio rerio
 Q8R4I4ENSMUSG00000024154Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GTF2A1 / general transcription factor IIA subunit 1 / P52655* / Q99PM3* / Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA alpha chain Transcription initiat...ENSGALG0000001057628


Protein motifs (from Interpro)
Interpro ID Name
 IPR004855  Transcription factor IIA, alpha/beta subunit
 IPR009083  Transcription factor IIA, helical
 IPR009088  Transcription factor IIA, beta-barrel


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005672 transcription factor TFIIA complex IBA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003713 transcription coactivator activity IBA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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