ENSGALG00000027067


Gallus gallus

Features
Gene ID: ENSGALG00000027067
  
Biological name :C1QTNF6
  
Synonyms : C1q and TNF related 6 / C1QTNF6
  
Possible biological names infered from orthology : Complement C1q tumor necrosis factor-related protein 6 / Q6IR41 / Q9BXI9
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 51475822
Gene end: 51477420
  
Corresponding Affymetrix probe sets: Gga.12978.1.S1_at (Chicken Array)   GgaAffx.7904.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043283
NCBI entrez gene - 427908     See in Manteia.
RefSeq - XM_004937750
RefSeq - XM_004937751
RefSeq - XM_425481
swissprot - R4GM35
Ensembl - ENSGALG00000027067
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 c1qtnf6aENSDARG00000055175Danio rerio
 c1qtnf6bENSDARG00000006544Danio rerio
 Q9BXI9ENSG00000133466Homo sapiens
 Q6IR41ENSMUSG00000022440Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG0000000525361
C1QA / complement C1q A chain / P02745* / P98086* / Complement C1q subcomponent subunit A *ENSGALG0000002156924
C1QTNF4 / C1q and TNF related 4 / Q8R066* / Q9BXJ3* / Complement C1q tumor necrosis factor-related protein 4 *ENSGALG0000000808023


Protein motifs (from Interpro)
Interpro ID Name
 IPR001073  C1q domain
 IPR008160  Collagen triple helix repeat
 IPR008983  Tumour necrosis factor-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051259 protein complex oligomerization IEA
 biological_processGO:0070208 protein heterotrimerization IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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