ENSGALG00000027240


Gallus gallus

Features
Gene ID: ENSGALG00000027240
  
Biological name :TSPAN13
  
Synonyms : tetraspanin 13 / TSPAN13
  
Possible biological names infered from orthology : O95857 / Q9D8C2
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 28607678
Gene end: 28624513
  
Corresponding Affymetrix probe sets: Gga.12486.1.S1_at (Chicken Array)   GgaAffx.23331.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048827
Ensembl peptide - ENSGALP00000061265
Ensembl peptide - ENSGALP00000057418
Ensembl peptide - ENSGALP00000054728
Ensembl peptide - ENSGALP00000042370
NCBI entrez gene - 420595     See in Manteia.
RefSeq - NM_001199612
RefSeq - XM_015281410
RefSeq Peptide - NP_001186541
swissprot - A0A1D5P7Y2
swissprot - A0A1D5PWT0
swissprot - R4GJP8
swissprot - A0A1D5PPC9
Ensembl - ENSGALG00000027240
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tspan13aENSDARG00000068883Danio rerio
 tspan13bENSDARG00000070479Danio rerio
 O95857ENSG00000106537Homo sapiens
 Q9D8C2ENSMUSG00000020577Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR018499  Tetraspanin/Peripherin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:0065009 regulation of molecular function IEA
 biological_processGO:1903169 regulation of calcium ion transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005246 calcium channel regulator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr