ENSGALG00000027695


Gallus gallus

Features
Gene ID: ENSGALG00000027695
  
Biological name :PCBP4
  
Synonyms : PCBP4 / poly(rC) binding protein 4
  
Possible biological names infered from orthology : P57723
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 3131564
Gene end: 3134816
  
Corresponding Affymetrix probe sets: Gga.6736.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000040675
NCBI entrez gene - 100859674     See in Manteia.
RefSeq - XM_015292855
RefSeq - XM_015292856
RefSeq - XM_015292857
swissprot - R4GF92
Ensembl - ENSGALG00000027695
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcbp4ENSDARG00000024276Danio rerio
 PCBP4ENSG00000090097Homo sapiens
 Pcbp4ENSMUSG00000023495Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PCBP3 / poly(rC) binding protein 3 / P57721* / P57722* / Mus musculus poly(rC) binding protein 3 (Pcbp3), transcript variant 2, mRNA.*ENSGALG0000000439461
PCBP2* / PCBP1* / Q15366* / P60335* / Q15365* / poly(rC) binding protein 1* / poly(rC) binding protein 2*ENSGALG0000004103046
ENSGALG0000001315541
HNRNPK* / P61978* / P61979* / Heteroous nuclear ribonucleoprotein K * / heterogeneous nuclear ribonucleoprotein K*ENSGALG0000001259130
Q5ZIQ3 / HNRNPKL / Heterogeneous nuclear ribonucleoprotein K / HNRNPK* / P61978* / P61979* / Heteroous nuclear ribonucleoprotein K *ENSGALG0000004008630
NOVA1 / NOVA alternative splicing regulator 1 / P51513* / Q9JKN6* / RNA-binding protein Nova-1 *ENSGALG0000000985028


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR033088  Poly(rC)-binding protein 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043488 regulation of mRNA stability IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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