ENSGALG00000029001


Gallus gallus
domaintrnaregulationbindingYRDCyrdc-likedhbpsynthaseribb-likealphabetasuperfamilymodificationtranslationalfidelitytransportcytoplasmmembranedouble-strandedrnanucleotidyltransferaseactivity

Features
Gene ID: ENSGALG00000029001
  
Biological name :YRDC
  
Synonyms : YRDC / yrdC N6-threonylcarbamoyltransferase domain containing
  
Possible biological names infered from orthology : Q3U5F4 / Q86U90 / yrdC domain containing (E.coli)
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 3571085
Gene end: 3573772
  
Corresponding Affymetrix probe sets: Gga.8412.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041295
NCBI entrez gene - 419610     See in Manteia.
RefSeq - XM_015297783
RefSeq - XM_417757
swissprot - R4GGW9
Ensembl - ENSGALG00000029001
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 yrdcENSDARG00000041428Danio rerio
 YRDCENSG00000196449Homo sapiens
 YrdcENSMUSG00000028889Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006070  YrdC-like domain
 IPR017945  DHBP synthase RibB-like alpha/beta domain superfamily


Gene Ontology (GO)
nitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of biological qualityestablishment of localizationnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of biological qualityestablishment of localizationnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of biological qualityestablishment of localizationnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of biological qualityestablishment of localizationnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of biological qualityestablishment of localizationnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of biological qualityestablishment of localizationnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of biological qualityestablishment of localizationnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of biological qualityestablishment of localizationnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of biological qualityestablishment of localizationnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processregulation of biological qualityestablishment of localizationnitrogen compound metabnitrogen compound metabolic processcellular metabolic proccellular metabolic processprimary metabolic proceprimary metabolic processorganic substance metaborganic substance metabolic processregulation of biologicaregulation of biological qualityestablishment of localiestablishment of localization
organic cyclic compound bindingheterocyclic compound bindingtransferase activityorganic cyclic compound bindingheterocyclic compound bindingtransferase activityorganic cyclic compound bindingheterocyclic compound bindingtransferase activityorganic cyclic compound bindingheterocyclic compound bindingtransferase activityorganic cyclic compound bindingheterocyclic compound bindingtransferase activityorganic cyclic compound bindingheterocyclic compound bindingtransferase activityorganic cyclic compound bindingheterocyclic compound bindingtransferase activityorganic cyclic compound bindingheterocyclic compound bindingtransferase activityorganic cyclic compound bindingheterocyclic compound bindingtransferase activityorganic cyclic compound bindingheterocyclic compound bindingtransferase activityorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingtransferase activitytransferase activity
cellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellcellmembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0002949 tRNA threonylcarbamoyladenosine modification IBA
 biological_processGO:0006450 regulation of translational fidelity IBA
 biological_processGO:0051051 negative regulation of transport IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000049 tRNA binding IBA
 molecular_functionGO:0003725 double-stranded RNA binding IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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