ENSGALG00000030101


Gallus gallus

Features
Gene ID: ENSGALG00000030101
  
Biological name :CSDC2
  
Synonyms : cold shock domain containing C2 / CSDC2
  
Possible biological names infered from orthology : Cold shock domain-containing protein C2 / Q91YQ3 / Q9Y534
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 49627010
Gene end: 49631391
  
Corresponding Affymetrix probe sets: Gga.9779.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047810
NCBI entrez gene - 425183     See in Manteia.
RefSeq - XM_003640376
RefSeq - XM_422970
swissprot - A0A1D5P545
Ensembl - ENSGALG00000030101
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSDC2 (1 of many)ENSDARG00000100167Danio rerio
 csdc2aENSDARG00000041323Danio rerio
 CSDC2ENSG00000172346Homo sapiens
 Csdc2ENSMUSG00000042109Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CARHSP1 / calcium regulated heat stable protein 1 / Q9CR86* / Q9Y2V2*ENSGALG0000004298164


Protein motifs (from Interpro)
Interpro ID Name
 IPR002059  Cold-shock protein, DNA-binding
 IPR011129  Cold shock domain
 IPR012340  Nucleic acid-binding, OB-fold
 IPR019844  Cold-shock conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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