ENSGALG00000030988


Gallus gallus

Features
Gene ID: ENSGALG00000030988
  
Biological name :RBPMS2
  
Synonyms : Q9W6I1 / RBPMS2 / RNA-binding protein with multiple splicing 2
  
Possible biological names infered from orthology : Q6ZRY4 / Q8VC52 / RNA binding protein, mRNA processing factor 2
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 1024394
Gene end: 1045984
  
Corresponding Affymetrix probe sets: Gga.2695.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053109
Ensembl peptide - ENSGALP00000050249
NCBI entrez gene - 395678     See in Manteia.
RefSeq - XM_015278760
RefSeq - NM_204869
RefSeq Peptide - NP_990200
swissprot - Q9W6I1
swissprot - A0A1D5PBW7
Ensembl - ENSGALG00000030988
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbpms2bENSDARG00000079578Danio rerio
 Q6ZRY4ENSG00000166831Homo sapiens
 Q8VC52ENSMUSG00000032387Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBPMS / RNA binding protein, mRNA processing factor / Q93062* / Q9WVB0* / RNA-binding protein with multiple splicing *ENSGALG0000001029173


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation ISS
 biological_processGO:0030514 negative regulation of BMP signaling pathway IMP
 biological_processGO:0048557 embryonic digestive tract morphogenesis IMP
 biological_processGO:0048565 digestive tract development IMP
 biological_processGO:0048661 positive regulation of smooth muscle cell proliferation IMP
 biological_processGO:0051151 negative regulation of smooth muscle cell differentiation IMP
 biological_processGO:0060391 positive regulation of SMAD protein signal transduction ISS
 cellular_componentGO:0005685 U1 snRNP IBA
 cellular_componentGO:0005737 cytoplasm ISS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003713 transcription coactivator activity ISS
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0008143 poly(A) binding ISS
 molecular_functionGO:0030619 U1 snRNA binding IBA
 molecular_functionGO:0035614 snRNA stem-loop binding IBA
 molecular_functionGO:0042803 protein homodimerization activity IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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