ENSGALG00000032588


Gallus gallus
actinARPC1Bwdproteincomplexcytoskeletondomainactin-relatedsubunitregulationfilamentarpbindingrepeatyvtnrepeat-like-containingsuperfamily-repeat-containingbpolymerizationcomplex-mediatednucleationcytoplasmstructuralconstituentdynamicsphagocyticcupformationephb-mediatedforward

Features
Gene ID: ENSGALG00000032588
  
Biological name :ARPC1B
  
Synonyms : actin related protein 2/3 complex subunit 1B / ARPC1B
  
Possible biological names infered from orthology : O15143 / Q9WV32
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 4384127
Gene end: 4390002
  
Corresponding Affymetrix probe sets: Gga.1009.1.S1_s_at (Chicken Array)   Gga.1009.2.S1_at (Chicken Array)   Gga.1009.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000063292
Ensembl peptide - ENSGALP00000050304
NCBI entrez gene - 416490     See in Manteia.
RefSeq - XM_015294172
RefSeq - NM_001030632
RefSeq Peptide - NP_001025803
swissprot - Q5ZI99
swissprot - A0A1L1RWT1
Ensembl - ENSGALG00000032588
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arpc1bENSDARG00000027063Danio rerio
 ARPC1BENSG00000130429Homo sapiens
 Arpc1bENSMUSG00000029622Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARPC1A / actin related protein 2/3 complex subunit 1A / Q92747* / Q9R0Q6*ENSGALG0000000469369


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017383  Actin-related protein 2/3 complex subunit 1
 IPR017986  WD40-repeat-containing domain
 IPR030141  Actin-related protein 2/3 complex subunit 1B


Gene Ontology (GO)
cellular component organizationcellular component biogenesisregulation of biological qualityactin filament-based processcellular component organizationcellular component biogenesisregulation of biological qualityactin filament-based processcellular component organizationcellular component biogenesisregulation of biological qualityactin filament-based processcellular component organizationcellular component biogenesisregulation of biological qualityactin filament-based processcellular component organizationcellular component biogenesisregulation of biological qualityactin filament-based processcellular component organizationcellular component biogenesisregulation of biological qualityactin filament-based processcellular component organizationcellular component biogenesisregulation of biological qualityactin filament-based processcellular component organizationcellular component biogenesisregulation of biological qualityactin filament-based processcellular component organizationcellular component biogenesisregulation of biological qualityactin filament-based processcellular component organizationcellular component biogenesisregulation of biological qualityactin filament-based processcellular component organizationcellular component organizationcellular component biogenesiscellular component biogenesisregulation of biological qualityregulation of biological qualityactin filament-based processactin filament-based process
protein bindingstructural constituent of cytoskeletonprotein-containing complex bindingprotein bindingstructural constituent of cytoskeletonprotein-containing complex bindingprotein bindingstructural constituent of cytoskeletonprotein-containing complex bindingprotein bindingstructural constituent of cytoskeletonprotein-containing complex bindingprotein bindingstructural constituent of cytoskeletonprotein-containing complex bindingprotein bindingstructural constituent of cytoskeletonprotein-containing complex bindingprotein bindingstructural constituent of cytoskeletonprotein-containing complex bindingprotein bindingstructural constituent of cytoskeletonprotein-containing complex bindingprotein bindingstructural constituent of cytoskeletonprotein-containing complex bindingprotein bindingstructural constituent of cytoskeletonprotein-containing complex bindingprotein bindingprotein bindingstructural constituent of cytoskeletonstructural constituent of cytoskeletonprotein-containing complex bindingprotein-containing complex binding
cellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellorganelleprotein-containing complexcellcellorganelleorganelleprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0030833 regulation of actin filament polymerization IEA
 biological_processGO:0034314 Arp2/3 complex-mediated actin nucleation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005885 Arp2/3 protein complex IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
Regulation of actin dynamics for phagocytic cup formation
EPHB-mediated forward signaling
RHO GTPases Activate WASPs and WAVEs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr