ENSGALG00000033471


Gallus gallus

Features
Gene ID: ENSGALG00000033471
  
Biological name :CALD1
  
Synonyms : CALD1 / caldesmon
  
Possible biological names infered from orthology : caldesmon 1 / Q05682
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 62436030
Gene end: 62495064
  
Corresponding Affymetrix probe sets: Gga.4988.1.S1_at (Chicken Array)   Gga.4988.2.S1_a_at (Chicken Array)   GgaAffx.21017.1.S1_s_at (Chicken Array)   GgaAffx.21386.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052956
Ensembl peptide - ENSGALP00000063531
Ensembl peptide - ENSGALP00000062170
Ensembl peptide - ENSGALP00000059428
NCBI entrez gene - 373965     See in Manteia.
RefSeq - NM_204158
RefSeq Peptide - NP_989489
swissprot - A0A1L1RXH5
swissprot - A0A1L1RTM1
swissprot - A0A1L1RKY9
swissprot - A0A1D5PJG3
Ensembl - ENSGALG00000033471
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cald1bENSDARG00000086391Danio rerio
 CALD1ENSG00000122786Homo sapiens
 Cald1ENSMUSG00000029761Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006017  Caldesmon
 IPR006018  Caldesmon/lymphocyte specific protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0017022 myosin binding IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
Smooth Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr