ENSGALG00000034111


Gallus gallus

Features
Gene ID: ENSGALG00000034111
  
Biological name :FOXF1
  
Synonyms : forkhead box F1 / FOXF1
  
Possible biological names infered from orthology : Forkhead box protein F1 / Q12946 / Q61080
  
Species: Gallus gallus
  
Chr. number: 11
Strand: -1
Band:
Gene start: 17623191
Gene end: 17625912
  
Corresponding Affymetrix probe sets: Gga.356.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048311
NCBI entrez gene - 395624     See in Manteia.
RefSeq - XM_414186
swissprot - A0A1D5P6I4
Ensembl - ENSGALG00000034111
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 foxf1ENSDARG00000015399Danio rerio
 FOXF1ENSG00000103241Homo sapiens
 Foxf1ENSMUSG00000042812Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FOXF2 / forkhead box F2 / O54743* / Q12947* / Forkhead box protein F2 *ENSGALG0000003192052
ENSGALG0000002815321
FOXE1 / forkhead box E1 / O00358* / Q8R2I0* / Forkhead box protein E1 *ENSGALG0000002625218
FOXG1 / Q90964 / Forkhead box protein G1 / P55316* / Q60987* / forkhead box G1*ENSGALG0000003636418
FOXP1 / Q58NQ4 / Forkhead box protein P1 / P58462* / Mus musculus forkhead box P1 (Foxp1), transcript variant 4, mRNA.*ENSGALG0000000776914
FOXP2 / forkhead box P2 / O15409* / P58463* / Forkhead box protein P2 *ENSGALG0000000942414
FOXP4 / forkhead box P4 / Q8IVH2* / Q9DBY0* / Forkhead box protein P4 *ENSGALG0000003349713
Gm5294* / AC187653.1*ENSGALG0000002429411


Protein motifs (from Interpro)
Interpro ID Name
 IPR001766  Fork head domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR018122  Fork head domain conserved site1
 IPR030456  Fork head domain conserved site 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001568 blood vessel development IEA
 biological_processGO:0001570 vasculogenesis IEA
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0001756 somitogenesis IEA
 biological_processGO:0001763 morphogenesis of a branching structure IEA
 biological_processGO:0002053 positive regulation of mesenchymal cell proliferation IEA
 biological_processGO:0003197 endocardial cushion development IEA
 biological_processGO:0003214 cardiac left ventricle morphogenesis IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007224 smoothened signaling pathway IEA
 biological_processGO:0007368 determination of left/right symmetry IEA
 biological_processGO:0007494 midgut development IEA
 biological_processGO:0007498 mesoderm development IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0009887 animal organ morphogenesis IEA
 biological_processGO:0010811 positive regulation of cell-substrate adhesion IEA
 biological_processGO:0014822 detection of wounding IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0030323 respiratory tube development IEA
 biological_processGO:0030324 lung development IEA
 biological_processGO:0030335 positive regulation of cell migration IEA
 biological_processGO:0031016 pancreas development IEA
 biological_processGO:0043305 negative regulation of mast cell degranulation IEA
 biological_processGO:0045198 establishment of epithelial cell apical/basal polarity IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048286 lung alveolus development IEA
 biological_processGO:0048371 lateral mesodermal cell differentiation IEA
 biological_processGO:0048557 embryonic digestive tract morphogenesis IEA
 biological_processGO:0048565 digestive tract development IEA
 biological_processGO:0048566 embryonic digestive tract development IEA
 biological_processGO:0048613 embryonic ectodermal digestive tract morphogenesis IEA
 biological_processGO:0048617 embryonic foregut morphogenesis IEA
 biological_processGO:0050728 negative regulation of inflammatory response IEA
 biological_processGO:0051145 smooth muscle cell differentiation IEA
 biological_processGO:0051150 regulation of smooth muscle cell differentiation IEA
 biological_processGO:0060425 lung morphogenesis IEA
 biological_processGO:0060426 lung vasculature development IEA
 biological_processGO:0060438 trachea development IEA
 biological_processGO:0060441 epithelial tube branching involved in lung morphogenesis IEA
 biological_processGO:0060461 right lung morphogenesis IEA
 biological_processGO:0060463 lung lobe morphogenesis IEA
 biological_processGO:0060841 venous blood vessel development IEA
 biological_processGO:0061030 epithelial cell differentiation involved in mammary gland alveolus development IEA
 biological_processGO:0071345 cellular response to cytokine stimulus IEA
 biological_processGO:0071407 cellular response to organic cyclic compound IEA
 biological_processGO:0072001 renal system development IEA
 biological_processGO:0072189 ureter development IEA
 biological_processGO:0090131 mesenchyme migration IEA
 biological_processGO:0097070 ductus arteriosus closure IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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