ENSGALG00000034586


Gallus gallus

Features
Gene ID: ENSGALG00000034586
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : nephrocystin 3 / NPHP3 / NPHP3-ACAD11 / NPHP3-ACAD11 readthrough (NMD candidate) / Q7TNH6 / Q7Z494
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 42493148
Gene end: 42514529
  
Corresponding Affymetrix probe sets: GgaAffx.7454.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046315
NCBI entrez gene - 420690     See in Manteia.
RefSeq - XM_418790
swissprot - A0A1D5P0Y5
Ensembl - ENSGALG00000034586
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nphp3ENSDARG00000078261Danio rerio
 NPHP3ENSG00000113971Homo sapiens
 NPHP3-ACAD11ENSG00000274810Homo sapiens
 Nphp3ENSMUSG00000032558Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KLC1* / Q07866* / AL139300.1* / kinesin light chain 1* / kinesin light chain 1 isoform 1G *ENSGALG0000001152815
KLC4 / kinesin light chain 4 / Q9DBS5* / Q9NSK0* / Mus musculus kinesin light chain 4 (Klc4), transcript variant 2, mRNA.*ENSGALG0000003038412


Protein motifs (from Interpro)
Interpro ID Name
 IPR006597  Sel1-like repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0007163 establishment or maintenance of cell polarity IEA
 biological_processGO:0007368 determination of left/right symmetry IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0030814 obsolete regulation of cAMP metabolic process IEA
 biological_processGO:0048496 maintenance of animal organ identity IEA
 biological_processGO:0060271 cilium assembly IEA
 biological_processGO:0060993 kidney morphogenesis IEA
 biological_processGO:1905515 non-motile cilium assembly IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0097543 ciliary inversin compartment IEA
 cellular_componentGO:0097546 ciliary base IEA


Pathways (from Reactome)
Pathway description
Trafficking of myristoylated proteins to the cilium


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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