ENSGALG00000038259


Gallus gallus

Features
Gene ID: ENSGALG00000038259
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 39307324
Gene end: 39492921
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000048397
Ensembl peptide - ENSGALP00000060265
swissprot - A0A1D5P6R7
swissprot - A0A1L1RNB6
Ensembl - ENSGALG00000038259
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbms3ENSDARG00000044574Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBMS1 / RNA binding motif single stranded interacting protein 1 / P29558* / Q91W59*ENSGALG0000001113256
RBMS2 / RNA binding motif single stranded interacting protein 2 / Q15434* / Q8VC70*ENSGALG0000003875754
PABPC1 / polyadenylate-binding protein 1 / PABPC3* / Q9H361* / P11940* / P29341* / poly(A) binding protein cytoplasmic 3* / poly(A) binding protein cytoplasmic 1*ENSGALG0000003028028
Q13310* / P0CB38* / PABPC4* / PABPC4L* / poly(A) binding protein cytoplasmic 4* / poly(A) binding protein cytoplasmic 4 like*ENSGALG0000000380027
PABPC1L / poly(A) binding protein cytoplasmic 1 like / Q4VXU2*ENSGALG0000000412327
ELAVL4 / ELAV-like protein 4 / P26378* / Q61701* / ELAV like RNA binding protein 4* / Mus musculus ELAV like RNA binding protein 4 (Elavl4), transcript variant 5, mRNA.*ENSGALG0000001053325
ELAVL2 / ELAV like RNA binding protein 2 / Q12926* / Q60899* / Mus musculus ELAV like RNA binding protein 1 (Elavl2), transcript variant 5, mRNA.*ENSGALG0000001579923
PUF60 / poly(U)-binding-splicing factor PUF60 / Q3UEB3* / Q9UHX1* / poly(U) binding splicing factor 60*ENSGALG0000003990121
ELAVL1 / ELAV-like protein 1 / P70372* / Q15717* / ELAV like RNA binding protein 1*ENSGALG0000000072618
RBMS3 / RNA binding motif single stranded interacting protein 3 / Q6XE24* / Q8BWL5* / RNA binding motif, single stranded interacting protein*ENSGALG000000114398


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr