ENSGALG00000038343


Gallus gallus

Features
Gene ID: ENSGALG00000038343
  
Biological name :H2AFJ
  
Synonyms : H2AFJ / histone H2A.J
  
Possible biological names infered from orthology : Hist2h2aa1 / Hist2h2aa2 / HIST2H2AA3 / HIST2H2AA4 / HIST2H2AC / histone cluster 2 H2A family member a3 / histone cluster 2 H2A family member a4 / histone cluster 2 H2A family member c / Histone H2A type 2-A / Histone H2A type 2-C / Q16777 / Q64523 / Q6FI13 / Q6GSS7
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 48125079
Gene end: 48125942
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000049578
NCBI entrez gene - 417947     See in Manteia.
RefSeq - NM_001030753
RefSeq Peptide - NP_001025924
swissprot - A0A1D5PA20
Ensembl - ENSGALG00000038343
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q16777ENSG00000184260Homo sapiens
 Q6FI13ENSG00000203812Homo sapiens
 Q6FI13ENSG00000272196Homo sapiens
 Q64523ENSMUSG00000068855Mus musculus
 Q6GSS7ENSMUSG00000063954Mus musculus
 Q6GSS7ENSMUSG00000064220Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000002711383
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000002731583
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000002837283
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000002994183
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000003157183
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000003264583
P02263 / H2A-VII / Histone H2A-IV / H2AFJ* / Q8R1M2* / Q9BTM1* / Histone H2A.J * / H2A histone family member J*ENSGALG0000003571583
H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSGALG0000002644979
H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSGALG0000004570579
H2AFY2 / H2A histone family member Y2 / Q8CCK0* / Q9P0M6* / Core histone macro-H2A.2 *ENSGALG0000000479458
ENSGALG0000001677157
H2AFY / O93327 / Core histone macro-H2A.1 / Q9QZQ8* / O75367* / H2A histone family member Y*ENSGALG0000004014156
ENSGALG0000001677054
H2AFB1* / H2AFB2* / H2AFB3* / P0C5Z0* / P0C5Y9* / H2A histone family member B3* / H2A histone family member B1* / H2A histone family member B2*ENSGALG0000001560935


Protein motifs (from Interpro)
Interpro ID Name
 IPR002119  Histone H2A
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold
 IPR032454  Histone H2A, C-terminal domain
 IPR032458  Histone H2A conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
PRC2 methylates histones and DNA
Condensation of Prophase Chromosomes
Oxidative Stress Induced Senescence
B-WICH complex positively regulates rRNA expression
Transcriptional regulation by small RNAs
Metalloprotease DUBs
Deposition of new CENPA-containing nucleosomes at the centromere
RNA Polymerase I Promoter Opening
RNA Polymerase I Chain Elongation
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function
Estrogen-dependent gene expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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