ENSGALG00000039238


Gallus gallus
SALL1regulationtranscriptionrnapolymeraseiibindingmorphogenesisglandembryonicdna-templatedproximalpromotersequence-specificdnazincfingerch-typekidneymesenchymalepithelialtransitioninvolvedmetanephrosheartgonadpituitarywnt

Features
Gene ID: ENSGALG00000039238
  
Biological name :SALL1
  
Synonyms : SALL1 / sal-like protein 1
  
Possible biological names infered from orthology : Q9NSC2 / spalt like transcription factor 1
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 6043786
Gene end: 6062292
  
Corresponding Affymetrix probe sets: Gga.1817.1.S1_at (Chicken Array)   Gga.1817.1.S2_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043894
Ensembl peptide - ENSGALP00000053895
Ensembl peptide - ENSGALP00000051776
Ensembl peptide - ENSGALP00000043618
NCBI entrez gene - 395446     See in Manteia.
RefSeq - NM_204707
RefSeq Peptide - NP_990038
swissprot - A0A1D5PFD0
swissprot - A0A1D5NTG3
Ensembl - ENSGALG00000039238
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sall1aENSDARG00000074319Danio rerio
 SALL1ENSG00000103449Homo sapiens
 Sall1ENSMUSG00000031665Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SALL3 / sal-like protein 3 / Q62255* / Q9BXA9* / spalt like transcription factor 3*ENSGALG0000004140451
SALL4 / spalt like transcription factor 4 / Q8BX22* / Q9UJQ4* / Sal-like protein 4 *ENSGALG0000004136540


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processcell communicationcellular response to stimulusnitrogen compounitrogen compound metabolic processbiosynthetic prbiosynthetic processcellular metabocellular metabolic processprimary metabolprimary metabolic processorganic substanorganic substance metabolic processanatomical struanatomical structure developmentcellular develocellular developmental processcell communicatcell communicationcellular responcellular response to stimulus
organic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityprotein bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor acDNA-binding transcription factor activityprotein bindingprotein binding
cellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellcellorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0003337 mesenchymal to epithelial transition involved in metanephros morphogenesis IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0008406 gonad development IEA
 biological_processGO:0021983 pituitary gland development IEA
 biological_processGO:0030177 positive regulation of Wnt signaling pathway IEA
 biological_processGO:0030325 adrenal gland development IEA
 biological_processGO:0042473 outer ear morphogenesis IEA
 biological_processGO:0042733 embryonic digit morphogenesis IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048566 embryonic digestive tract development IEA
 biological_processGO:0060173 limb development IEA
 biological_processGO:0061034 olfactory bulb mitral cell layer development IEA
 cellular_componentGO:0000792 heterochromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0010369 chromocenter IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008013 beta-catenin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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