ENSGALG00000039269


Gallus gallus

Features
Gene ID: ENSGALG00000039269
  
Biological name :RNF213
  
Synonyms : ring finger protein 213 / RNF213
  
Possible biological names infered from orthology : E9Q555 / Q63HN8
  
Species: Gallus gallus
  
Chr. number: 18
Strand: -1
Band:
Gene start: 9594760
Gene end: 9619312
  
Corresponding Affymetrix probe sets: Gga.14706.1.S1_at (Chicken Array)   GgaAffx.4384.1.S1_at (Chicken Array)   GgaAffx.4386.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055778
Ensembl peptide - ENSGALP00000056507
swissprot - A0A1D5PS95
swissprot - A0A1D5PUA4
Ensembl - ENSGALG00000039269
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01058333.1ENSDARG00000113458Danio rerio
 rnf213aENSDARG00000099465Danio rerio
 Q63HN8ENSG00000173821Homo sapiens
 E9Q555ENSMUSG00000070327Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR018957  Zinc finger, C3HC4 RING-type
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031248  RNF213 protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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