ENSGALG00000041072


Gallus gallus

Features
Gene ID: ENSGALG00000041072
  
Biological name :TATDN1
  
Synonyms : TatD DNase domain containing 1 / TATDN1
  
Possible biological names infered from orthology : Putative deoxyribonuclease TATDN1 / Q6P1N9 / Q6P8M1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 138585822
Gene end: 138599159
  
Corresponding Affymetrix probe sets: Gga.13245.1.A1_at (Chicken Array)   Gga.13245.1.A1_s_at (Chicken Array)   Gga.4460.1.A1_a_at (Chicken Array)   Gga.4460.1.A1_x_at (Chicken Array)   Gga.4460.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052268
Ensembl peptide - ENSGALP00000061168
Ensembl peptide - ENSGALP00000055174
Ensembl peptide - ENSGALP00000054393
NCBI entrez gene - 770677     See in Manteia.
RefSeq - XM_001234015
RefSeq - XM_004940030
RefSeq - XM_015283146
swissprot - A0A1L1RQU1
swissprot - A0A1D5PHI9
swissprot - A0A1D5PQK9
swissprot - A0A1D5PNF2
Ensembl - ENSGALG00000041072
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tatdn1ENSDARG00000036924Danio rerio
 Q6P1N9ENSG00000147687Homo sapiens
 Q6P8M1ENSMUSG00000050891Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001130  TatD family
 IPR018228  Deoxyribonuclease, TatD-related, conserved site
 IPR032466  Metal-dependent hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006259 DNA metabolic process IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0016788 hydrolase activity, acting on ester bonds IEA
 molecular_functionGO:0016888 endodeoxyribonuclease activity, producing 5"-phosphomonoesters IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr