ENSGALG00000042001


Gallus gallus

Features
Gene ID: ENSGALG00000042001
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : AC098582.1 / E3 ISG15--protein ligase Herc6 / F2Z461 / HECT and RLD domain containing E3 ubiquitin protein ligase 5 / HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 / HERC5 / HERC6 / Q8IVU3 / Q9UII4
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 35288232
Gene end: 35306393
  
Corresponding Affymetrix probe sets: GgaAffx.20966.1.S1_s_at (Chicken Array)   GgaAffx.6546.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047294
Ensembl peptide - ENSGALP00000058345
NCBI entrez gene - 422513     See in Manteia.
RefSeq - XM_015276605
RefSeq - XM_015276606
RefSeq - XM_420476
swissprot - A0A1D5PZD4
swissprot - A0A1D5P3N9
Ensembl - ENSGALG00000042001
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-281g13.4ENSDARG00000075389Danio rerio
 si:ch211-281g13.5ENSDARG00000074052Danio rerio
 slc47a2.2ENSDARG00000074136Danio rerio
 AC098582.1ENSG00000285385Homo sapiens
 HERC5ENSG00000138646Homo sapiens
 HERC6ENSG00000138642Homo sapiens
 Herc6ENSMUSG00000029798Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HERC4 / HECT and RLD domain containing E3 ubiquitin protein ligase 4 / Q5GLZ8* / Q6PAV2* / Probable E3 ubiquitin-protein ligase HERC4 *ENSGALG0000000386134
HERC3 / probable E3 ubiquitin-protein ligase HERC3 / Q15034* / HECT and RLD domain containing E3 ubiquitin protein ligase 3*ENSGALG0000001036333
HERC2 / HECT and RLD domain containing E3 ubiquitin protein ligase 2 / O95714* / Q4U2R1* / E3 ubiquitin-protein ligase HERC2 *ENSGALG0000001673918
HERC1 / HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 / Q15751*ENSGALG0000000338117
UBE3A / ubiquitin protein ligase E3A / O08759* / Q05086*ENSGALG0000003494415
HECTD2 / HECT domain E3 ubiquitin protein ligase 2 / Q5U5R9* / Q8CDU6* / Probable E3 ubiquitin-protein ligase HECTD2 *ENSGALG0000003804315
HECTD3* / Q3U487* / Q5T447* / E3 ubiquitin-protein ligase HECTD3 * / HECT domain E3 ubiquitin protein ligase 3*ENSGALG0000001021711
HECTD3* / Q3U487* / Q5T447* / E3 ubiquitin-protein ligase HECTD3 * / HECT domain E3 ubiquitin protein ligase 3*ENSGALG0000001020310
ENSGALG000000232372


Protein motifs (from Interpro)
Interpro ID Name
 IPR000408  Regulator of chromosome condensation, RCC1
 IPR000569  HECT domain
 IPR009091  Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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