ENSGALG00000042706


Gallus gallus

Features
Gene ID: ENSGALG00000042706
  
Biological name :TMC2
  
Synonyms : TMC2 / transmembrane channel-like protein 2
  
Possible biological names infered from orthology : Q8R4P4 / Q8TDI7 / transmembrane channel like 2
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 44470402
Gene end: 44496991
  
Corresponding Affymetrix probe sets: GgaAffx.7587.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046225
NCBI entrez gene - 428456     See in Manteia.
RefSeq - NM_001039324
RefSeq Peptide - NP_001034413
swissprot - A0A1D5P0P7
Ensembl - ENSGALG00000042706
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmc2aENSDARG00000033104Danio rerio
 tmc2bENSDARG00000030311Danio rerio
 TMC2ENSG00000149488Homo sapiens
 Tmc2ENSMUSG00000060332Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMC1 / transmembrane channel-like protein 1 / Q8R4P5* / Q8TDI8* / transmembrane channel like 1*ENSGALG0000001514558
TMC3 / transmembrane channel-like protein 3 / Q7Z5M5* / transmembrane channel like 3*ENSGALG0000000637635
TMC7 / transmembrane channel like 7 / Q7Z402* / Q8C428* / Transmembrane channel-like protein 7 *ENSGALG0000000688916
TMC5 / transmembrane channel like 5 / Q32NZ6* / Q6UXY8* / Transmembrane channel-like protein 5 *ENSGALG0000000691116
TMC6 / transmembrane channel like 6 / Q7TN60* / Q7Z403* / transmembrane channel-like gene family 6*ENSGALG0000003887516


Protein motifs (from Interpro)
Interpro ID Name
 IPR012496  TMC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050910 detection of mechanical stimulus involved in sensory perception of sound IEA
 biological_processGO:0060005 vestibular reflex IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 biological_processGO:1903169 regulation of calcium ion transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032426 stereocilium tip IEA
 molecular_functionGO:0005245 voltage-gated calcium channel activity IEA
 molecular_functionGO:0008381 mechanosensitive ion channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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