ENSGALG00000043359


Gallus gallus

Features
Gene ID: ENSGALG00000043359
  
Biological name :RRP9
  
Synonyms : ribosomal RNA processing 9, U3 small nucleolar RNA binding protein / RRP9
  
Possible biological names infered from orthology : O43818 / Q91WM3 / U3 small nucleolar RNA-interacting protein 2
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 127204
Gene end: 130389
  
Corresponding Affymetrix probe sets: GgaAffx.25538.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045601
NCBI entrez gene - 415888     See in Manteia.
RefSeq - XM_015292737
swissprot - A0A1D5NYZ0
Ensembl - ENSGALG00000043359
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rrp9ENSDARG00000041991Danio rerio
 RRP9ENSG00000114767Homo sapiens
 Rrp9ENSMUSG00000041506Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0031428 box C/D snoRNP complex IEA
 molecular_functionGO:0034511 U3 snoRNA binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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