ENSGALG00000043684


Gallus gallus

Features
Gene ID: ENSGALG00000043684
  
Biological name :PSMD13
  
Synonyms : 26S proteasome non-ATPase regulatory subunit 13 / P84169 / PSMD13
  
Possible biological names infered from orthology : proteasome 26S subunit, non-ATPase 13 / proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 / Q9UNM6 / Q9WVJ2
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 1573301
Gene end: 1582152
  
Corresponding Affymetrix probe sets: GgaAffx.26139.1.S1_at (Chicken Array)   GgaAffx.26139.1.S1_s_at (Chicken Array)   GgaAffx.26139.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046961
Ensembl peptide - ENSGALP00000057950
Ensembl peptide - ENSGALP00000054631
NCBI entrez gene - 422990     See in Manteia.
RefSeq - XM_015286266
swissprot - A0A1D5PYA1
swissprot - A0A1D5P2R2
swissprot - P84169
Ensembl - ENSGALG00000043684
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 psmd13ENSDARG00000016239Danio rerio
 PSMD13ENSG00000185627Homo sapiens
 Psmd13ENSMUSG00000025487Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000717  Proteasome component (PCI) domain
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IBA
 biological_processGO:0007127 meiosis I IEA
 biological_processGO:0043248 proteasome assembly IBA
 cellular_componentGO:0000502 proteasome complex IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005829 cytosol IBA
 cellular_componentGO:0005838 proteasome regulatory particle IEA
 cellular_componentGO:0008541 proteasome regulatory particle, lid subcomplex IBA
 cellular_componentGO:0022624 proteasome accessory complex IEA
 molecular_functionGO:0005198 structural molecule activity IBA


Pathways (from Reactome)
Pathway description
GLI3 is processed to GLI3R by the proteasome
Ubiquitin Mediated Degradation of Phosphorylated Cdc25A
Regulation of RUNX3 expression and activity
MAPK6/MAPK4 signaling
TNFR2 non-canonical NF-kB pathway
Neddylation
SCF-beta-TrCP mediated degradation of Emi1
Autodegradation of Cdh1 by Cdh1:APC/C
Regulation of PTEN stability and activity
Regulation of RUNX2 expression and activity
RUNX1 regulates transcription of genes involved in differentiation of HSCs
Autodegradation of the E3 ubiquitin ligase COP1
FCERI mediated NF-kB activation
Separation of Sister Chromatids
Degradation of beta-catenin by the destruction complex
Cdc20:Phospho-APC/C mediated degradation of Cyclin A
Cross-presentation of soluble exogenous antigens (endosomes)
AUF1 (hnRNP D0) binds and destabilizes mRNA
ABC-family proteins mediated transport
Activation of NF-kappaB in B cells
APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1
APC/C:Cdc20 mediated degradation of Securin
Antigen processing: Ubiquitination & Proteasome degradation
Asymmetric localization of PCP proteins
CLEC7A (Dectin-1) signaling
CDT1 association with the CDC6:ORC:origin complex
CDK-mediated phosphorylation and removal of Cdc6
Degradation of GLI1 by the proteasome
Degradation of DVL
Degradation of AXIN
FBXL7 down-regulates AURKA during mitotic entry and in early mitosis
Downstream TCR signaling
Hedgehog on state
Hedgehog ligand biogenesis
Interleukin-1 signaling
Orc1 removal from chromatin
Neutrophil degranulation
Regulation of RAS by GAPs
Regulation of ornithine decarboxylase (ODC)
SCF(Skp2)-mediated degradation of p27/p21
Ub-specific processing proteases
UCH proteinases
Ubiquitin-dependent degradation of Cyclin D1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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