ENSGALG00000044726


Gallus gallus

Features
Gene ID: ENSGALG00000044726
  
Biological name :SNAPC4
  
Synonyms : small nuclear RNA activating complex polypeptide 4 / SNAPC4
  
Possible biological names infered from orthology : Q5SXM2 / Q8BP86 / snRNA-activating protein complex subunit 4
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 8377715
Gene end: 8391727
  
Corresponding Affymetrix probe sets: GgaAffx.1249.1.S1_at (Chicken Array)   GgaAffx.1249.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000064622
NCBI entrez gene - 417133     See in Manteia.
RefSeq - XM_015279797
RefSeq - XM_415416
RefSeq - XM_015279798
RefSeq - XM_015279799
swissprot - A0A1L1S0G0
Ensembl - ENSGALG00000044726
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snapc4ENSDARG00000067673Danio rerio
 Q5SXM2ENSG00000165684Homo sapiens
 Q8BP86ENSMUSG00000036281Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MYBL2 / myb-related protein B / P10244* / P48972* / MYB proto-oncogene like 2*ENSGALG000000035038
MYB / transcriptional activator Myb / P06876* / P10242* / MYB proto-oncogene, transcription factor*ENSGALG000000139568
MYBL1 / myb-related protein A / P10243* / MYB proto-oncogene like 1*ENSGALG000000333047


Protein motifs (from Interpro)
Interpro ID Name
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR017877  Myb-like domain
 IPR017930  Myb domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009301 snRNA transcription IEA
 biological_processGO:0042795 snRNA transcription by RNA polymerase II IEA
 biological_processGO:0042796 snRNA transcription by RNA polymerase III IEA
 cellular_componentGO:0019185 snRNA-activating protein complex IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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