ENSMUSG00000004462


Mus musculus

Features
Gene ID: ENSMUSG00000004462
  
Biological name :Tbccd1
  
Synonyms : Q640P7 / Tbccd1 / TBCC domain-containing protein 1
  
Possible biological names infered from orthology : Q9NVR7 / TBCC domain containing 1
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: B1
Gene start: 22813215
Gene end: 22857569
  
Corresponding Affymetrix probe sets: 10438672 (MoGene1.0st)   1430601_at (Mouse Genome 430 2.0 Array)   1436752_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000004576
NCBI entrez gene - 70573     See in Manteia.
MGI - MGI:1917823
RefSeq - XM_006522568
RefSeq - NM_001081368
RefSeq - NM_001316746
RefSeq - XM_006522565
RefSeq - XM_006522566
RefSeq - XM_006522567
RefSeq - XM_006522564
RefSeq Peptide - NP_001303675
RefSeq Peptide - NP_001074837
swissprot - Q640P7
Ensembl - ENSMUSG00000004462
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbccd1ENSDARG00000056886Danio rerio
 Q5ZKT1ENSGALG00000006566Gallus gallus
 Q9NVR7ENSG00000113838Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006599  CARP motif
 IPR012945  Tubulin binding cofactor C-like domain
 IPR017901  C-CAP/cofactor C-like domain
 IPR036223  Adenylate cyclase-associated CAP, C-terminal superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008360 regulation of cell shape IEA
 biological_processGO:0030334 regulation of cell migration IEA
 biological_processGO:0051661 maintenance of centrosome location IEA
 biological_processGO:0051684 maintenance of Golgi location IEA
 cellular_componentGO:0000922 spindle pole IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0031616 spindle pole centrosome IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001415 increased exploration in new environment "greater amount of time spent investigating new location" [J:28825]
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Allelic Composition: Spns2tm1b(KOMP)Wtsi/Spns2tm1b(KOMP)Wtsi
Genetic Background: B6Brd;B6Dnk;B6N-Tyrc-Brd-Spns2tm1b(KOMP)Wtsi/WtsiH

 MP:0010093 decreased circulating magnesium level "a reduction in the blood concentration of magnesium" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Spns2tm1b(KOMP)Wtsi/Spns2tm1b(KOMP)Wtsi
Genetic Background: B6Brd;B6Dnk;B6N-Tyrc-Brd-Spns2tm1b(KOMP)Wtsi/WtsiH

 MP:0011239 abnormal skin coloration "a variation in an expected skin color or complexion that may be due to inflammation, pigment defects or other causes" [MGI:llw2]
Show

Allelic Composition: Spns2tm1b(KOMP)Wtsi/Spns2tm1b(KOMP)Wtsi
Genetic Background: B6Brd;B6Dnk;B6N-Tyrc-Brd-Spns2tm1b(KOMP)Wtsi/WtsiH

 MP:0011967 increased or absent threshold for auditory brainstem response "increase in the value at which one or more sound frequencies or broadband clicks first elicits a recordable response generated by electrical activity of neurons in the ascending auditory system, or complete lack of a recordable response at any frequency or broadband click" [MGI:csmith]
Show

Allelic Composition: Spns2tm1b(KOMP)Wtsi/Spns2tm1b(KOMP)Wtsi
Genetic Background: B6Brd;B6Dnk;B6N-Tyrc-Brd-Spns2tm1b(KOMP)Wtsi/WtsiH

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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