ENSMUSG00000006850


Mus musculus
proteinimportcomponentmembranebindingTmco6armadilloimportin-alphaimportin-beta-bindingdomainarmadillo-likehelicalarmadillo-typefoldnucleusbiologicalprocesscellularintracellularintegralnuclearsignalreceptoractivity

Features
Gene ID: ENSMUSG00000006850
  
Biological name :Tmco6
  
Synonyms : Q8BQX5 / Tmco6 / Transmembrane and coiled-coil domain-containing protein 6
  
Possible biological names infered from orthology : Q96DC7 / transmembrane and coiled-coil domains 6
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: B2
Gene start: 36735068
Gene end: 36742391
  
Corresponding Affymetrix probe sets: 10454953 (MoGene1.0st)   1451692_at (Mouse Genome 430 2.0 Array)   1459587_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000007046
NCBI entrez gene - 71983     See in Manteia.
MGI - MGI:1919233
RefSeq - XM_006526277
RefSeq - NM_028036
RefSeq - XM_006526276
RefSeq Peptide - NP_082312
swissprot - Q8BQX5
Ensembl - ENSMUSG00000006850
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmco6ENSDARG00000016336Danio rerio
 TMCO6ENSGALG00000037776Gallus gallus
 TMCO6ENSG00000113119Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR002652  Importin-alpha, importin-beta-binding domain
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
macromolecule localizationestablishment of localizationcellular localizationmacromolecule localizationestablishment of localizationcellular localizationmacromolecule localizationestablishment of localizationcellular localizationmacromolecule localizationestablishment of localizationcellular localizationmacromolecule localizationestablishment of localizationcellular localizationmacromolecule localizationestablishment of localizationcellular localizationmacromolecule localizationestablishment of localizationcellular localizationmacromolecule localizationestablishment of localizationcellular localizationmacromolecule localizationestablishment of localizationcellular localizationmacromolecule localizationestablishment of localizationcellular localizationmacromolecule localizationmacromolecule localizationestablishment of localizationestablishment of localizationcellular localizationcellular localization
protein bindingnucleocytoplasmic carrier activityprotein bindingnucleocytoplasmic carrier activityprotein bindingnucleocytoplasmic carrier activityprotein bindingnucleocytoplasmic carrier activityprotein bindingnucleocytoplasmic carrier activityprotein bindingnucleocytoplasmic carrier activityprotein bindingnucleocytoplasmic carrier activityprotein bindingnucleocytoplasmic carrier activityprotein bindingnucleocytoplasmic carrier activityprotein bindingnucleocytoplasmic carrier activityprotein bindingprotein bindingnucleocytoplasmic carrier activitynucleocytoplasmic carrier activity
cellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellcellmembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0006606 protein import into nucleus IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0061608 nuclear import signal receptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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