ENSMUSG00000014039


Mus musculus
zincfingerPrdm15chbindingsetdomainringfyvephd-type-typesuperfamilynucleusnucleoplasmnuclearbodynucleicacidprotein

Features
Gene ID: ENSMUSG00000014039
  
Biological name :Prdm15
  
Synonyms : Mus musculus PR domain containing 15 (Prdm15), transcript variant 2, mRNA. / Prdm15
  
Possible biological names infered from orthology : P57071 / PR/SET domain 15
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: C4
Gene start: 97791467
Gene end: 97851850
  
Corresponding Affymetrix probe sets: 10441280 (MoGene1.0st)   1455459_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000120497
Ensembl peptide - ENSMUSP00000113791
Ensembl peptide - ENSMUSP00000093533
Ensembl peptide - ENSMUSP00000113002
Ensembl peptide - ENSMUSP00000115814
NCBI entrez gene - 114604     See in Manteia.
MGI - MGI:1930121
RefSeq - XM_011246090
RefSeq - XM_006522863
RefSeq - XM_006522864
RefSeq - XM_006522865
RefSeq - XM_006522866
RefSeq - XM_006522868
RefSeq - XM_006522869
RefSeq - XM_006522870
RefSeq - XM_006522872
RefSeq - NM_001359077
RefSeq - NM_001359078
RefSeq - NM_144789
RefSeq Peptide - NP_001346006
RefSeq Peptide - NP_001346007
RefSeq Peptide - NP_659038
swissprot - D3Z7Q9
swissprot - D3YYH8
swissprot - E9Q8T2
swissprot - E9Q6A1
swissprot - D6RIL7
Ensembl - ENSMUSG00000014039
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PRDM15ENSDARG00000098867Danio rerio
 PRDM15ENSGALG00000019178Gallus gallus
 P57071ENSG00000141956Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Prdm10 / Q3UTQ7 / PR domain zinc finger protein 10 / Q9NQV6* / PR/SET domain 10*ENSMUSG0000004249620


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
organic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingprotein bindingprotein binding
cellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumen
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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